Profile

Prof Len Thomas

Prof Len Thomas
Professor of Statistics


 

My main research areas are: (1) Development of methods and software for estimating the size, density and distribution of wild animal and plant populations. I mostly work on a group of related methods called distance sampling. (2) Use of computer intensive methods to fit and compare stochastic models of wildlife population dynamics. Here, I mostly work on algorithms called particle filters. For more details about my work, including links to my publications, please see my personal home page.

source: symbiosis

 

Recent publications


25  (of 25 published available) for lt5 with keyword Ecology clear keyword filter. (source: University of St Andrews PURE)
Please click title of any item for full details.

2018 (12)
Methods in Ecology and Evolution
vol.9 pp.2362-2371
(Article)
Estimating effective detection area of static passive acoustic data loggers from playback experiments with cetacean vocalisations
Hanna K. Nuuttila, Katharina Brundiers, Michael Dähne, Jens C. Koblitz, Len Thomas, Winnie Courtene-Jones, Peter G. H. Evans, John R. Turner, Jim D. Bennell, Jan G. Hiddink 
Keywords: Abundance, C-POD, Density estimation, Detection function, Effective detection radius, Static passive acoustic monitoring
2018 (1)
Journal of Applied Ecology
vol.55 pp.396-404
(Review article)
Marine mammals and sonar
Catriona M Harris, Len Thomas, Erin Falcone, John Hildebrand, Dorian Houser, Petter Kvadsheim, Frans-Peter A. Lam, Patrick Miller, David J. Moretti, Andrew Read, Hans Slabbekoorn, Brandon L. Southall, Peter Lloyd Tyack, Douglas Wartzok, Vincent Janik 
Keywords: Sonar, Cetaceans, Human disturbance, Impact assessment, Anti-predator response, Anthropogenic noise, Behavioural response, Marine mammals, Dose response

Ecology and Evolution
vol.Early View 
(Review article)
Understanding the population consequences of disturbance
Enrico Pirotta, Daniel P. Costa, Erica Fleishman, Scott D. Kraus, David Lusseau, David Moretti, Leslie Frances New, Robert Schilling Schick, Lisa K. Schwarz, Samantha E. Simmons, Len Thomas, Peter Lloyd Tyack, Michael J. Weise, Randall S. Wells, John Harwood 
Keywords: Anthropogenic disturbance, Environmental impact assessments, Marine mammals, Nonconsumptive effects, Population consequences, Trait-mediated indirect interactions, Uncertainty
2017 (31/1)
Endangered Species Research
vol.33 pp.235-252
(Article)
Assigning stranded bottlenose dolphins to source stocks using stable isotope ratios following the Deepwater Horizon oil spill
A A Hohn, Len Thomas, R. H. Carmichael, J. Litz, C. Clemons-Chevis, S. F. Shippee, C. Sinclair, S. Smith, T. R. Speakman, M. C. Tumlin, E. S. Zolman 
Keywords: Carbon, Gulf of Mexico, Nitrogen, Stock structure, Sulfur, Tursiops truncatusEcology, Nature and Landscape Conservation
2017 (31/1)
Endangered Species Research
vol.33 pp.265-279
(Article)
2017 (31/1)
Endangered Species Research
vol.33 pp.193-209
(Article)
Survival, density, and abundance of common bottlenose dolphins in Barataria Bay (USA) following the Deepwater Horizon oil spill
Trent L. McDonald, Fawn E. Hornsby, Todd R. Speakman, Eric S. Zolman, Keith D. Mullin, Carrie Sinclair, Patricia E. Rosel, Len Thomas, Lori H. Schwacke 
Keywords: Capture-recapture, Photo-identification, Robust design, Spatial-capture model, Tursiops truncatusEcology, Nature and Landscape Conservation
2017 (27/12)
Marine Ecology Progress Series
vol.585 pp.213-227
(Article)
Whale distribution in a breeding area
Daniel Danilewicz, Philip Steven Hammond, Len Thomas, Alexandre N Zerbini 
Keywords: Shelter, Conservation, Density surface model, Cetacean, Line transect, Reproduction
2016 (19/5)
PLoS One
vol.11 pp.1-16
(Article)
An efficient acoustic density estimation method with human detectors applied to gibbons in Cambodia
Benjamin M. Rawson, David Louis Borchers, Ben Stevenson, Tiago A. Marques, Len Thomas 
2015 (3)
Methods in Ecology and Evolution
vol.6 pp.278-288
(Article)
2015 (10)
Ocean and Coastal Management
vol.115 pp.17-24
(Article)
Impacts of anthropogenic noise on marine life
Andrew J Wright, LK Blight, R Bruintjes, R Canessa, CW Clark, S Cullis-Suzuki, DT Dakin, C Erbe, Philip Steven Hammond, MD Merchant, PD O'Hara, J Purser, AN Radford, SD Simpson, Len Thomas, MA Wale 
Keywords: Anthropogenic, Conservation, Ecology, Marine, Ocean noise, Policy, Shipping
2015 (2)
Deep Sea Research Part II: Topical Studies in Oceanography
vol.112 pp.143-157
(Article)
2014

(Book)
Modelling population dynamics
Ken Newman, Stephen Terrence Buckland, Byron Morgan, Ruth King, David Louis Borchers, Diana Cole, Panagiotis Besbeas, Olivier Gimenez, Len Thomas 
2014 (7)
Marine Mammal Science
vol.30 pp.923–938
(Article)
2014 (24/12)
Biology Letters
vol.10 
(Article)
Statistical ecology comes of age
Olivier Gimenez, Stephen Terrence Buckland, Byron J. T. Morgan, Nicolas Bez, Sophie Bertrand, Remi Choquet, Stephane Dray, Marie-Pierre Etienne, Rachel Fewster, Frederic Gosselin, Bastien Merigot, Pascal Monestiez, Juan M. Morales, Frederic Mortier, Francois Munoz, Otso Ovaskainen, Sandrine Pavoine, Roger Pradel, Frank M. Schurr, Len Thomas, Wilfried Thuiller, Verena Trenkel, Perry de Valpine, Eric Rexstad 
Keywords: Citizen science, Hidden Markov model, Hierarchical model, Movement ecology, Software package
2014 (27/1)
Marine Ecology Progress Series
vol.496 pp.99-108
(Article)
Using short-term measures of behaviour to estimate long-term fitness of southern elephant seals.
Leslie Frances New, James Clark, Daniel Costa, Erica Fleishman, Mark Hindell, Tin Klanjšček, David Lusseau, Scott Kraus, Clive McMahon, Patrick Robinson, Robert Schilling Schick, Lisa Schwartz, Samantha Simmons, Len Thomas, Peter Lloyd Tyack, John Harwood 
Keywords: Kalman filter, Mirounga leonina, Population consequences of disturbance , State-space model, Telemetry data
2013 (5)
Biological Reviews of the Cambridge Philosophical Society
vol.88 pp.287–309
(Article)
Estimating animal population density using passive acoustics
Tiago A. Marques, Len Thomas, Stephen Martin, David Mellinger, Jessica Ward, David Moretti, Danielle Harris, Peter Lloyd Tyack 
2013
Journal of Animal Ecology
vol.82 pp.1300-1315
(Article)
Estimating resource acquisition and at-sea body condition of a marine predator
Robert Schilling Schick, Leslie New, Len Thomas, Daniel Costa, Mark Hindell, Clive McMahon, Patrick Robinson, Samantha Simmons, Michele Thums, John Harwood, James Clark 
Keywords: Resource acquisition, Bayesian, Elephant seals, Markov chain Monte Carlo, Satellite telemetry, State-space model, Body condition, Año Nuevo, Macquarie Island
2013 (3)
ICES Journal of Marine Science

(Article)
2013 (11)
Methods in Ecology and Evolution
vol.4 pp.1001-1010
(Article)
2012 (7/5)
Marine Ecology Progress Series
vol.453 pp.227-240
(Article)

Contact Details:

Prof Len Thomas
The Observatory
Buchanan Gardens
University of St Andrews
St Andrews
KY16 9LZ
Fife
UK

tel: (44) (0) 1334 461801
fax: (44) (0) 1334 461800
room: 208
email: lt5@st-andrews.ac.uk

Related:

research@st-andrews
Personal Homepage
Centre for Research into Ecological & Environmental Modelling
School of Mathematics & Statistics
National Centre for Statistical Ecology
Scottish Oceans Institute

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Contact

The Secretary
Scottish Oceans Institute
Institiud Chuantan na h-Alba
Gatty Marine Laboratory
East Sands St Andrews
KY16 8LB
Scotland
UK

tel: +44 (0) 1334 463472
fax: +44 (0) 1334 463443
email: soi@st-andrews.ac.uk

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