Publications

Recent publications


50  (of 62 published available) for Scottish Oceans Institute with keyword Cetaceans clear keyword filter. (source: University of St Andrews PURE)
Please click title of any item for full details.


Scientific Reports
vol.8 
(Article)
Assessing cetacean surveys throughout the Mediterranean Sea
Laura Mannocci, Jason J. Roberts, Patrick N. Halpin, Matthieu Authier, Oliver Boisseau, Mohamed Nejmeddine Bradai, Ana Cañadas, Carla Chicote, Léa David, Nathalie Di-Méglio, Caterina M. Fortuna, Alexandros Frantzis, Manel Gazo, Philip Steven Hammond, DraÅ¡ko Holcer, Kristin Kaschner, Dani Kerem, Giancarlo Lauriano, Tim Lewis, Giuseppe Notarbartolo di Sciara, Simone Panigada, Juan Antonio Raga, Aviad Scheinin, Vincent Ridoux, Adriana Vella, Joseph Vella 
2018 (2)
Aquatic Conservation: Marine and Freshwater Ecosystems
vol.28 pp.216-230
(Article)
Cetacean rapid assessment: an approach to fill knowledge gaps and target conservation across large data deficient areas
Gillian Tracey Braulik, Magreth Kasuga, Anja Wittich, Jeremy J Kiszka, Jamie Donald John MacAulay, Douglas Michael Gillespie, Jonathan Charles David Gordon, Said Shaib Said, Philip Steven Hammond 
Keywords: Cetaceans, Distribution, Environmental impact assessement, Management, Marine spatial planning, Rapid assessment, Tanzania
2018 (9/1)
Journal of Experimental Biology
vol.221 
(Article)
2018 (12/3)
Marine Ecology Progress Series
vol.590 pp.247-266
(Article)
2018 (6)
Marine Policy
vol.92 pp.61-72
(Article)
Framework for mapping key areas for marine megafauna to inform Marine Spatial Planning
Amélie A. Augé, Maria P. Dias, Ben Lascelles, Alastair M.M. Baylis, Andy Black, P. Dee Boersma, Paulo Catry, Sarah Crofts, Filippo Galimberti, Jose Pedro Granadeiro, April Hedd, Katrin Ludynia, Juan F. Masello, William Montevecchi, Richard A. Phillips, Klemens Pütz, Petra Quillfeldt, Ginger A. Rebstock, Simona Sanvito, Iain J. Staniland, Andrew Stanworth, David Thompson, Megan Tierney, Philip N. Trathan, John P. Croxall 
Keywords: Marine conservation, MSP, Patagonian Shelf, Seabirds, Seals, South Atlantic, Tracking data
2018 (6/12)
Journal of Experimental Biology
vol.221 
(Article)
High field metabolic rates of wild harbour porpoises
Laia Rojano-Doñate, Birgitte I. McDonald, Danuta M. Wisniewska, Mark Johnson, Jonas Teilmann, Magnus Wahlberg, Jakob Højer-Kristensen, Peter T. Madsen 
Keywords: Bio-logging, Doubly labelled water, Energetics, Food intake, Phocoena, Respiration
2018 (14/2)
Proceedings of the Royal Society B: Biological Sciences
vol.285 
(Article)
2018 (1)
Journal of Applied Ecology
vol.55 pp.396-404
(Review article)
Marine mammals and sonar
Catriona M Harris, Len Thomas, Erin Falcone, John Hildebrand, Dorian Houser, Petter Kvadsheim, Frans-Peter A. Lam, Patrick Miller, David J. Moretti, Andrew Read, Hans Slabbekoorn, Brandon L. Southall, Peter Lloyd Tyack, Douglas Wartzok, Vincent Janik 
Keywords: Sonar, Cetaceans, Human disturbance, Impact assessment, Anti-predator response, Anthropogenic noise, Behavioural response, Marine mammals, Dose response

Methods in Ecology and Evolution
vol.Early View 
(Article)
Model selection with overdispersed distance sampling data
Stephen Terrence Buckland, Marie-Lyne Després-Einspenner, Hjalmar S. Kühl 
Keywords: Animal abundance, Camera trapping, Cue counting, Distance sampling, Model selection, Overdispersion, QAIC
2018 (5)
Behavioral Ecology and Sociobiology
vol.72 
(Article)
Night-life of Bryde’s whales
Sahar Izadi, Mark Johnson, Natacha Aguilar de Soto, Rochelle Constantine 
Keywords: Rest, Sleep, Whales, Diel behavior, Accelerometry, Biologging
2018 (2)
Environmental Pollution
vol.233 pp.407-418
(Article)

Journal of Experimental Biology
vol.221 
(Article)
Selective reactions to different killer whale call categories in two delphinid species
Matthew T. Bowers, Ari S. Friedlaender, Vincent Janik, Douglas P. Nowacek, Nicola Quick, Brandon L. Southall, Andrew Read 
Keywords: Antipredator behavior, Acoustic discrimination, Non-linear acousitcs, Pilot whales, Risso's dolphins
2017 (4)
Ecosphere
vol.8 
(Article)
2017 (10/8)
Endangered Species Research
vol.34 pp.149-165
(Article)
Animal Counting Toolkit
Katie Gaut, Rowenna Gryba, Jeffrey Moore, Eric Rexstad, Doug Sandilands, Justin Steventon, Randall Reeves 
Keywords: Abundance, Boat, Bycatch, Capacity, Conservation, Dolphin
2017 (7)
Deep Sea Research Part II: Topical Studies in Oceanography
vol.141 pp.8-19
(Article)
Distribution, abundance and habitat use of deep diving cetaceans in the North-East Atlantic
Emer Rogan, Ana Cañadas, Kelly Macleod, M. Begoña Santos, Bjarni Mikkelsen, Ainhize Uriarte, Olivier Van Canneyt, José Antonio Vázquez, Philip Steven Hammond 
Keywords: Design-based abundance, Model-based abundance, Beaked whales, Sperm whales, Pilot whales, Distribution, Deep divers, Habitat models
2017 (7)
Deep Sea Research Part II: Topical Studies in Oceanography
vol.141 pp.41-58
(Article)
Estimating cetacean density and abundance in the Central and Western Mediterranean Sea through aerial surveys
Simone Panigada, Giancarlo Lauriano, Greg Donovan, Nino Pierantonio, Ana Cañadas, José Antonio Vázquez, M Louise Burt 
2017 (5)
Ecology and Evolution
vol.7 pp.3494-3506
(Article)
2017 (14/2)
PLoS One
vol.12 
(Article)
From the track to the ocean
Giovani Fiore, Erik Anderson, C. Spencer Garborg, Mark Murray, Mark Johnson, Michael J Moore, Laurens Howle, K. Alex Shorter 
2017 (18/10)
Journal of Experimental Biology
vol.220 pp.3802-3811
(Article)
2017 (27/10)
Journal of Cetacean Research and Management
vol.16 pp.29-38
(Article)
2017 (6)
Animal Conservation
vol.20 pp.282-293
(Article)
Rebuilding beluga stocks in West Greenland
M. P. Heide-Jørgensen, R. G. Hansen, S. Fossette, N. H. Nielsen, David Louis Borchers, H. Stern, L. Witting 
Keywords: Aerial survey, Bayesian assessment, Hidden Markov model, Line transect, Beluga, Sea ice cover, Abundance estimates, Cetaceans
2017 (31/1)
Endangered Species Research
vol.33 pp.95-106
(Review article)
The Deepwater Horizon oil spill marine mammal injury assessment
Ryan Takeshita, Laurie Sullivan, Cynthia Smith, Tracy Collier, Ailsa Jane Hall, Tom Brosnan, Teri Rowles, Lori Schwacke 
Keywords: Deepwater horizon, Exposure, Injury assessment, Marine mammals, Natural resource damage assessment, Oil, PetroleumEcology, Nature and Landscape Conservation
2016 (17/8)
Journal of Experimental Biology
vol.219 pp.2458-2468
(Article)
2016 (21/11)
Current Biology
vol.26 pp.R1175-R1176
(Article)
Cognitive control of heart rate in diving harbor porpoises
Siri Elmegaard, Mark Johnson, Peter Madsen, Birgitte McDonald 
2016 (13/7)
Methods in Ecology and Evolution
vol.7 pp.762-769
(Article)
Echolocation detections and digital video surveys provide reliable estimates of the relative density of harbour porpoises
Laura D. Williamson, Kate L. Brookes, Beth E. Scott, Isla M. Graham, Gareth Bradbury, Philip Steven Hammond, Paul M. Thompson 
Keywords: Abundance, Acoustics, Availability, C-POD, Density surface modelling, Digital survey, Distance sampling, Harbour porpoise
2016 (7)
Animal Cognition
vol.19 pp.847-853
(Article)
2016 (6/12)
Endangered Species Research
vol.31 pp.293-315
(Review article)
2016 (12)
Proceedings of Meetings on Acoustics
vol.27 
(Review article)
From physiology to policy
Natacha Aguilar de Soto, Sascha Kate Hooker, Saana Isojunno, Mark Johnson, Patrick Miller, Peter Lloyd Tyack, Paul Wensveen, Carl Robert Donovan, Catriona M Harris, Danielle Harris, Laura Helen Marshall, Cornelia Sabrina Oedekoven, Rocio Prieto, Len Thomas 
2016 (29/12)
Marine Ecology Progress Series
vol.562 pp.211-220
(Article)
Naval sonar disrupts foraging behaviour in humpback whales
Lise D. Sivle, Paul Wensveen, Petter Kvadsheim, Frans-Peter A. Lam, Fleur Visser, Charlotte Cure, Catriona M Harris, Peter Lloyd Tyack, Patrick Miller 
Keywords: Humpback whale, Megaptera novaeangliae, Naval sonar, Behavioral response, Lung feeding
2016 (26/10)
Movement Ecology
vol.4 
(Review article)
2016 (3)
Biological Conservation
vol.195 pp.136-145
(Article)
Searching for trends in river dolphin abundance
Jeffrey E. Moore, Catalina Gomez-Salazar, Fernando Trujillo, M Louise Burt 
Keywords: Abundance, Cryptic, Habitat loss, River dolphin, Inia, Sotalia, Amazon, Bayesian methods, Monitoring
2016
pp.399-407
(Conference contribution)
The challenges of analyzing behavioral response study data
Catriona M Harris, Len Thomas, Dinara Sadykova, Stacy Lynn De Ruiter, Peter Lloyd Tyack, Brandon L. Southall, Andrew J. Read, Patrick Miller 
Keywords: Sonar, Cetaceans, Change-point, Dose-response, State-space modelling
2015

(Book)
Distance sampling
Stephen Terrence Buckland, Eric Rexstad, Tiago A. Marques, Cornelia Sabrina Oedekoven 
2015 (17/2)
Frontiers in Ecology and Evolution
vol.3 
(Article)
Distribution, abundance, and feeding ecology of baleen whales in Icelandic waters: have recent environmental changes had an effect?
Gisli A Vikingsson, Daniel G Pike, Héðinn Valdimarsson, Anna Schleimer, Thorvaldur Gunnlaugsson, Teresa Silva, Bjarki Þ Elvarsson, Bjarni Mikkelsen, Nils Øien, Geneviève Desportes, Valur Bogason, Philip Steven Hammond 
Keywords: Climate change, Finwhale, Common minke whale, Whale abundance, Feeding ecology, Humpback whale, Oceanic warming, Habitat modeling
2015 (20/11)
Ecosphere
vol.6 
(Article)
2015 (5)
Marine Environmental Research
vol.106 pp.68-81
(Article)
How effectively do horizontal and vertical response strategies of long-finned pilot whales reduce sound exposure from naval sonar?
Paul Wensveen, Alexander M von Benda-Beckmann, Michael A Ainslie, Frans-Peter A Lam, Petter H Kvadsheim, Peter Lloyd Tyack, Patrick Miller 
Keywords: Cetaceans, Disturbance, Behaviour, Environmental impact, Noise, Risk assessment, Individual-based models, Sonar
2015 (1)
Marine Mammal Science
vol.31 pp.298–321
(Article)
Recommendations for photo-identification methods used in capture-recapture models with cetaceans
Kim Urian, A Gorgone, Andrew J Read, Brian Balmer, Randall S Wells, Per Berggren, John W Durban, Tomo Eguchi, Will Rayment, Philip Steven Hammond 
Keywords: Capture-recapture, Mark-recapture, Photo-identification, Abundance, Population size estimates
2015 (10)
Ocean and Coastal Management
vol.115 pp.10-16
(Article)
The modelling and assessment of whale-watching impacts
Leslie Frances New, Ailsa Jane Hall, R. Harcourt, G. Kaufman, E.C.M. Parsons, H.C. Pearson, A.M. Cosentino, Robert Schilling Schick 
Keywords: Anthropogenic impacts, Disturbance, Management, Marine mammals, Sustainable tourism
2014 (9)
Methods in Oceanography
vol.10 pp.70-89
(Article)
Assessing the potential of autonomous submarine gliders for ecosystem monitoring across multiple trophic levels (plankton to cetaceans) and pollutants in shallow shelf seas
L. Suberg, R.B. Wynn, J.V.D. Kooij, L. Fernand, S. Fielding, D. Guihen, Douglas Michael Gillespie, Mark Johnson, I.J. Allan, B. Vrana, P.I. Miller, D. Smeed, A.R. Jones 
Keywords: Autonomous underwater vehicles, Submarine glider, Slocum, Ecosystem monitoring, Multiple trophic levels
2014 (22/12)
Viruses
vol.6 pp.5145-5181
(Article)
Cetacean morbillivirus
M.-F. Van Bressem, P.J. Duignan, A. Banyard, M. Barbieri, K.M. Colegrove, S. de Guise, G. di Guardo, A. Dobson, M. Domingo, D. Fauquier, A Fernandez, T. Goldstein, B. Grenfell, K.R. Groch, F. Gulland, B.A. Jensen, P.D. Jepson, Ailsa Jane Hall, T. Kuiken, S. Mazzariol, S.E. Morris, O. Nielsen, J.A. Raga, T.K. Rowles, J. Saliki, E. Sierra, N. Stephens, B. Stone, I. Tomo, J. Wang, T. Waltzek, J.F.X. Wellehan 
Keywords: Cetacean morbillivirus, Epidemics, Mass stranding, SLAM, Phylogeny, Pathogenesis, Diagnosis, Endemic infections
2014 (4)
Marine Mammal Science
vol.30 pp.726-746
(Article)
Drag of suction cup tags on swimming animals
K. Alex Shorter, Mark M. Murray, Mark Johnson, Michael Moore, Laurens E. Howle 
Keywords: Bio-logging, CFD, Hydrodynamic tag design, Suction cups, Performance, Penguins, Behavior, Devices, Whales, Sea, Cetaceans, Telemetry, Surfaces, Speed
2014 (2)
Biological Conservation
vol.170 pp.338-339
(Letter)
Large scale surveys for cetaceans
Philip Steven Hammond, Douglas Michael Gillespie, Philip Lovell, Filipa Isabel Pereira Samarra, Kelly Macleod, Mark L Tasker, Per Berggren, David Louis Borchers, M Louise Burt, Charles G. M. Paxton, Ana Canadas, Genevieve Desportes, Greg P Donovan, Anita Gilles, Kristina Lehnert, Ursula Siebert, Jonathan Charles David Gordon, Russell Leaper, Mardik Leopold, Meike Scheidat, Nils Oien, Vincent Ridoux, Emer Rogan, Henrik Skov, Jonas Teilmann, Olivier Van Canneyt, Jose Antonio Vazquez 
Keywords: Line transect sampling, Survey design, Abundance estimation, Cetacean, Conservation, EU Habitats Directive
2014 (12)
Global Ecology and Conservation
vol.2 pp.118-128
(Article)
Long-term trends in the use of a protected area by small cetaceans in relation to changes in population status
Barbara Cheney, Ross Corkery, John Durban, Kate Grellier, Philip Steven Hammond, Valentina Islas Villanueva, Vincent Janik, Susan Lusseau, Kim Parsons, Ben Wilson, Paul Thompson 
Keywords: Abundance, Bayesian, Bottlenose dolphin, Mark-recapture, Photo-identification, Special Area of Conservation
2014
Journal of Cetacean Research and Management
vol.14 pp.23-35
(Article)
Occurrence, distribution and abundance of cetaceans in Onslow Bay, North Carolina, USA
Andrew, J. Read, S. Barco, J. Bell, David Louis Borchers, M Louise Burt, E.W. Cummings, J. Dunn, J. Fougeres, L. Hazen, L.E. Williams-Hodge, A-M. Laura, R.J. McAlarney, P. Nilsson, D.A. Pabst, Charles G. M. Paxton, S.Z. Schneider, Kim Urian, D.M. Waples, W.A. McLellan 
Keywords: Abundance estimate, Monitoring, Survey-combined, Trends, Photo-ID
2014
Behaviour
vol.151 pp.1453-1477
(Article)
2013 (8)
Biological Conservation
vol.164 pp.107-122
(Article)
Cetacean abundance and distribution in European Atlantic shelf waters to inform conservation and management
Philip Steven Hammond, Kelly Macleod, Per Berggren, David Louis Borchers, M Louise Burt, Ana Cañadas, Genevieve Desportes, Greg P Donovan, Anita Gilles, Douglas Michael Gillespie, Jonathan Charles David Gordon, Lex Hiby, Iwona Kuklik, Russell Leaper, Kristina Lehnert, Mardik Leopold, Philip Lovell, Nils Øien, Charles G. M. Paxton, Vincent Ridoux, Emer Rogan, Filipa Isabel Pereira Samarra, Meike Scheidat, Marina Sequeira, Ursula Siebert, Henrik Skov, Mark Tasker, Jonas Teilmann, Olivier Van Canneyt, José Antonio Vázquez 
Keywords: Conservation status, North Sea, Line transect sampling, SCANS, Harbour porpoise, Bottlenose dolphin, Common dolphin, White-beaked dolphin, Minke whale, Bycatch, Habitats Directive
2013 (2/4)
Scientific Reports
vol.3 
(Article)
Responses of male sperm whales (Physeter macrocephalus) to killer whale sounds
Charlotte Cure, Ricardo Nuno Antunes, Ana Catarina De Carvalho Alves, Fleur Visser, Petter H. Kvadsheim, Patrick Miller 
Keywords: Behavioural ecology, Animal behaviour

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Scottish Oceans Institute
Institiud Chuantan na h-Alba
Gatty Marine Laboratory
East Sands St Andrews
KY16 8LB
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tel: +44 (0) 1334 463472
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