Publications

Recent publications


50  (of 64 published available) for Scottish Oceans Institute with keyword Freshwater clear keyword filter. (source: University of St Andrews PURE)
Please click title of any item for full details.

2019 (1/1)
Ecology and Evolution
vol.9 pp.653-663
(Article)
2019 (29/1)
Journal of Fish Biology
vol.94 pp.183-186
(Article)
2018 (24/7)
Global Ecology and Biogeography
vol.27 pp.760-786
(Article)
BioTIME
Maria Dornelas, Laura H. Antão, Faye Helen Moyes, Amanda E. Bates, Anne Magurran, DuÅ¡an Adam, Asem A. Akhmetzhanova, Ward Appeltans, José Manuel Arcos, Narayanan Ayyappan, Gal Badihi, Andrew H. Baird, Tiago Egydio Barreto, Claus Bässler, Alecia Bellgrove, Jonathan Belmaker, Lisandro Benedetti-cecchi, Brian J. Bett, Anne D. Bjorkman, Magdalena Błażewicz, Shane A. Blowes, Christopher P. Bloch, Timothy C. Bonebrake, Susan Boyd, Matt Bradford, Andrew J. Brooks, James H. Brown, Helge Bruelheide, Phaedra Budy, Fernando Carvalho, Edward Castañeda-moya, Chaolun Allen Chen, John F. Chamblee, Tory J. Chase, Laura Siegwart Collier, Sharon K. Collinge, Richard Condit, Elisabeth J. Cooper, J. Hans C. Cornelissen, Unai Cotano, Shannan Kyle Crow, Gabriella Damasceno, Claire H. Davies, Robert A. Davis, Frank P. Day, Steven Degraer, Tim S. Doherty, Timothy E. Dunn, Giselda Durigan, J. Emmett Duffy, Dor Edelist, Graham J. Edgar, Robin Elahi, Sarah C. Elmendorf, Anders Enemar, S. K. Morgan Ernest, Rubén Escribano, Marc Estiarte, Brian S. Evans, Tung-yung Fan, Fabiano Turini Farah, Luiz Loureiro Fernandes, Fábio Z. Farneda, Alessandra Fidelis, Robert Fitt, Anna Maria Fosaa, Geraldo Antonio Daher Correa Franco, Grace E. Frank, William R. Fraser, Hernando García, Roberto Cazzolla Gatti, Or Givan, Elizabeth Gorgone-barbosa, William A. Gould, Corinna Gries, Gary D. Grossman, Julio R. Gutierréz, Stephen Hale, Mark E. Harmon, John Harte, Gary Haskins, Donald L. Henshaw, Luise Hermanutz, Pamela Hidalgo, Pedro Higuchi, Andrew Hoey, Gert Van Hoey, Annika Hofgaard, Kristen Holeck, Robert D. Hollister, Richard Holmes, Mia Hoogenboom, Chih-hao Hsieh, Stephen P. Hubbell, Falk Huettmann, Christine L. Huffard, Allen H. Hurlbert, Natália Macedo Ivanauskas, David Janík, Ute Jandt, Anna Jażdżewska, Tore Johannessen, Jill Johnstone, Julia Jones, Jungwon Kang, Tasrif Kartawijaya, Erin C. Keeley, Douglas A. Kelt, Rebecca Jane Kinnear, Kari Klanderud, Halvor Knutsen, Christopher C. Koenig, Alessandra R. Kortz, Kamil Král, Linda A. Kuhnz, Chao-yang Kuo, David J. Kushner, Claire Laguionie-marchais, Lesley T. Lancaster, Cheol Min Lee, Jonathan S. Lefcheck, Esther Lévesque, David Lightfoot, Francisco Lloret, John D. Lloyd, Adrià López-baucells, Maite Louzao, Joshua S. Madin, Borgþór Magnússon, Shahar Malamud, Iain McCombe Matthews, Kent P. Mcfarland, Brian Mcgill, Diane Mcknight, William O. Mclarney, Jason Meador, Peter L. Meserve, Daniel J. Metcalfe, Christoph F. J. Meyer, Anders Michelsen, Nataliya Milchakova, Tom Moens, Even Moland, Jon Moore, Carolina Mathias Moreira, Jörg Müller, Grace Murphy, Isla H. Myers-smith, Randall W. Myster, Andrew Naumov, Francis Neat, James A. Nelson, Michael Paul Nelson, Stephen F. Newton, Natalia Norden, Jeffrey C. Oliver, Esben M. Olsen, Vladimir G. Onipchenko, Krzysztof Pabis, Robert J. Pabst, Alain Paquette, Sinta Pardede, David Maxwell Paterson, Raphaël Pélissier, Josep Peñuelas, Alejandro Pérez-matus, Oscar Pizarro, Francesco Pomati, Eric Post, Herbert H. T. Prins, John C. Priscu, Pieter Provoost, Kathleen L. Prudic, Erkki Pulliainen, B. R. Ramesh, Andrew Rassweiler, Jose Eduardo Rebelo, Daniel C. Reed, Peter B. Reich, Suzanne M. Remillard, Anthony J. Richardson, J. Paul Richardson, Itai Van Rijn, Ricardo Rocha, Victor H. Rivera-monroy, Christian Rixen, Kevin P. Robinson, Ricardo Ribeiro Rodrigues, Denise De Cerqueira Rossa-feres, Lars Rudstam, Henry Ruhl, Catalina S. Ruz, Erica M. Sampaio, Nancy Rybicki, Andrew Rypel, Sofia Sal, Beatriz Salgado, Flavio A. M. Santos, Ana Paula Savassi-coutinho, Sara Scanga, Jochen Schmidt, Robert Schooley, Fakhrizal Setiawan, Kwang-tsao Shao, Gaius R. Shaver, Sally Sherman, Thomas W. Sherry, Jacek Siciński, Ana Carolina Da Silva, Fernando Rodrigues Da Silva, Fabio L. Silveira, Jasper Slingsby, Tracey Smart, Sara J. Snell, Nadejda A. Soudzilovskaia, Gabriel B. G. Souza, Flaviana Maluf Souza, Vinícius Castro Souza, Christopher D. Stallings, Rowan Stanforth, Emily H. Stanley, José Mauro Sterza, Maarten Stevens, Rick Stuart-smith, Yzel Rondon Suarez, Sarah Supp, Jorge Yoshio Tamashiro, Sukmaraharja Tarigan, Gary P. Thiede, Simon Thorn, Anne Tolvanen, Maria Teresa Zugliani Toniato, Ørjan Totland, Robert R. Twilley, Gediminas Vaitkus, Nelson Valdivia, Martha Isabel Vallejo, Thomas J. Valone, Carl Van Colen, Jan Vanaverbeke, Fabio Venturoli, Hans M. Verheye, Marcelo Vianna, Rui P. Vieira, Tomáš VrÅ¡ka, Con Quang Vu, Lien Van Vu, Robert B. Waide, Conor Waldock, Dave Watts, Sara Webb, Tomasz Wesołowski, Ethan P. White, Claire E. Widdicombe, Dustin Wilgers, Richard Williams, Stefan B. Williams, Mark Williamson, Michael R. Willig, Trevor J. Willis, Sonja Wipf, Kerry D. Woods, Eric J. Woehler, Michael L. Zettler 
Keywords: Biodiversity, Global, Spatial, Species richness, Temporal, Turnover
2018 (2)
Aquatic Conservation: Marine and Freshwater Ecosystems
vol.28 pp.216-230
(Article)
Cetacean rapid assessment: an approach to fill knowledge gaps and target conservation across large data deficient areas
Gillian Tracey Braulik, Magreth Kasuga, Anja Wittich, Jeremy J Kiszka, Jamie Donald John MacAulay, Douglas Michael Gillespie, Jonathan Charles David Gordon, Said Shaib Said, Philip Steven Hammond 
Keywords: Cetaceans, Distribution, Environmental impact assessement, Management, Marine spatial planning, Rapid assessment, Tanzania
2018 (15/11)
Marine Ecology Progress Series
vol.606 pp.91-104
(Article)
2018 (20/2)
Proceedings of the National Academy of Sciences of the United States of America
vol.115 pp.1843-1847
(Article)
Divergent biodiversity change within ecosystems
Anne Magurran, Amy Elizabeth Deacon, Faye Helen Moyes, Hideyasu Shimadzu, Maria Dornelas, Dawn Phillip, Indar Ramnarine 
Keywords: Biodiversity change, Tropical ecology, Freshwater, Temporal turnover, Community-level regulation

Aquatic Conservation: Marine and Freshwater Ecosystems
vol.Early View 
(Article)
2018 (2)
Aquatic Conservation: Marine and Freshwater Ecosystems
vol.28 pp.194-204
(Article)

Palaeogeography, Palaeoclimatology, Palaeoecology
vol.In press 
(Article)
Influences of coral genotype and seawater pCO2 on skeletal Ba/Ca and Mg/Ca in cultured massive Porites spp. corals
Nicola Allison, Catherine Sarah Cole, Christopher James Hintz, Kenneth Hintz, Adrian Anthony Finch 
Keywords: Calcification, Photosynthesis, Respiration, KD Ba/Ca, KD Mg/Ca, Coral
2018 (12)
Evolutionary Applications
vol.11 pp.1975-1989
(Article)
Modelling the invasion history of Sinanodonta woodiana in Europe
Adam Konečný, Oana Popa, Veronika Bartáková, Karel Douda, Josef Bryja, Carl Smith, Luis Popa, Martin Reichard 
Keywords: Anodonta woodiana, Approximate Bayesian computation, Biological invasion, Introduction history, Invasion genetics, Population genetics, Unionid mussel
2018 (15/12)
Palaeogeography, Palaeoclimatology, Palaeoecology
vol.511 pp.119-143
(Article)
Palynology and micropalaeontology of the Pliocene - Pleistocene transition in outcrop from the western Caspian Sea, Azerbaijan
Keith Richards, Christiaan G.C. van Baak, John Athersuch, Thomas M. Hoyle, Marius Stoica, William Austin, Alix Gayle Cage, Antoine A.H. Wonders, Fabienne Marret, Carmel A. Pinnington 
Keywords: Akchagyl, Apsheron, Dinoflagellate cysts, Pollen, Ostracods, Foraminifera

Ecology of Freshwater Fish
vol.Early View 
(Article)
Red operculum spots, body size, maturation and evidence for a satellite male phenotype in non-native European populations of pumpkinseed Lepomis gibbosus
Grzegorz Zięba, Carl Smith, Michael G. Fox, Stan Yavno, Eva Záhorská, Mirosław Przybylski, Gérard Masson, Julien Cucherousset, Hugo Verreycken, Hein H. van Kleef, Gordon H. Copp 
Keywords: Alternative mating strategy, Carotenoid, Centrarchidae, GLMM, Sexual selection, Visual signal

Aquatic Conservation: Marine and Freshwater Ecosystems
vol.Early View 
(Article)
Spatial versus temporal structure
James A. Thorburn, Rosie Jones, Francis Neat, Cecilia Pinto, Victoria Bendall, Stuart Hetherington, Leslie Noble, Cath Jones 
Keywords: Coastal, Ocean, Distribution, Fish, Fishing, Elasmobranch management, Genetic structure, Relatedness, Social interactions

Journal of Evolutionary Biology
vol.Early View 
(Article)
Sperm is a sexual ornament in rose bitterling
Carl Smith, Rowena Grace Alison Spence, Martin Reichard 
Keywords: Ejaculate, Mate choice, Pheromone, Sexual selection, Spermatozoa
2018 (1/10)
Water Research
vol.142 pp.159-166
(Article)
2018 (2)
Aquatic Conservation: Marine and Freshwater Ecosystems
vol.28 pp.205-215
(Article)
Towards the identification of ecological management units
Joan Giménez, Marie Louis, Enrique Barón, Francisco Ramírez, Philippe Verborgh, Pauline Gauffier, Ruth Esteban, Ethel Eljarrat, Damià Barceló, Manuela G. Forero, Renaud de Stephanis 
Keywords: Bottlenose dolphins, Conservation, Management units, Multi-disciplinary approaches, Time-scale approaches
2017 (10)
Evolutionary Ecology
vol.31 pp.769-783
(Article)
Avoidance of host resistance in the oviposition-site preferences of rose bitterling
Romain Rouchet, Carl Smith, Huanzhang Liu, Caroline Methling, Karel Douda, Dan Yu, Qionying Tang, Martin Reichard 
Keywords: Brood parasitism, Coevolutionary dynamic, Egg ejection, Host selection, Oviposition choice, Parasite specialisation
2017 (7)
Environmental Biology of Fishes
vol.100 pp.839-849
(Article)
Evaluating detectability of freshwater fish assemblages in tropical streams
Amy Elizabeth Deacon, Rajindra Mahabir, Devan Inderlall, Indar W. Ramnarine, Anne Magurran 
Keywords: Trinidad, Electrofishing, Alpha diversity, Detectability, Species richness, Sampling methods, Gear bias
2017 (8)
Aquatic Conservation: Marine and Freshwater Ecosystems
vol.27 pp.839-845
(Article)
Genetic population structure of harbour seals in the United Kingdom and neighbouring waters
Morten Tange Olsen, Valentina Islas, Jefferson Alden Graves, Aubrie Onoufriou, Cecile Vincent, Sophie Brasseur, Anne Kristine Frie, Ailsa Jane Hall 
Keywords: Coastal, Genetics, Mammal, Microsatellite loci, Phoca vitulina, Seal Management Units
2017 (17/2)
Aquatic Conservation: Marine and Freshwater Ecosystems
vol.27 pp.268-281
(Article)
2017 (11/10)
vol.8 
(Commissioned report)
Modelling harbour seal movements
Bernie J McConnell, Sophie Caroline Smout, Mick Wu 
Keywords: Individual based model , Seals, TelemetryScottish Government
2017 (1/8)
Marine Biology
vol.164 
(Article)
2017 (2)
Global Ecology and Biogeography
vol.26 pp.203-215
(Article)
2017 (21/12)

(Commissioned report)
2016 (5)
Statistical Science
vol.31 pp.142-150
(Article)
A conversation with Richard M. Cormack
Stephen Terrence Buckland 
2016 (15/12)

(Commissioned report)
Fine-scale harbour seal at-sea usage around Orkney and the North coast of Scotland
Esther Lane Jones, Sophie Caroline Smout, Clinton John Blight, Carol Elizabeth Sparling, Bernie J McConnell 
Keywords: Scottish Government
2016

(Commissioned report)
2016

(Commissioned report)
2016

(Commissioned report)
Investigations into the interactions between harbour seals (Phoca vitulina) and vessels in the inner Moray Firth
Joseph Onoufriou, Esther Lane Jones, Gordon Drummond Hastie, David Thompson 
Keywords: Scottish Government
2016 (3)
Marine Biology
vol.163 
(Article)
Marine life of the sea trout
Eva B. Thorstad, Christopher David Todd, Ingebrigt Uglem, PÃ¥l Arne Bjørn, Patrick G. Gargan, Knut Wiik Vollset, Elina Halttunen, Steinar KÃ¥lÃ¥s, Marius Berg, Bengt Finstad 
Keywords: Lepeophtheirus salmonis, Salmo trutta, SalmonidaeAquatic Science, Ecology, Evolution, Behavior and Systematics, Ecology
2016 (17/11)
Journal of the Acoustical Society of America
vol.140 pp.3755-3764
(Article)
Physical constraints of cultural evolution of dialects in killer whales
Olga A. Filatova, Filipa I. P. Samarra, Lance G. Barrett-Lennard, Patrick Miller, John K. B. Ford, Harald Yurk, Craig O. Matkin, Erich Hoyt 
2016 (2)
vol.7 
(Commissioned report)
Scottish Government Demonstration Strategy
Carol Elizabeth Sparling, Douglas Michael Gillespie, Gordon Drummond Hastie, Jonathan Charles David Gordon, Jamie Donald John MacAulay, Chloe Elizabeth Malinka, Mick Wu, Bernie J McConnell 
Keywords: marine renewables, passive acoustic monitoring, active acoustic monitoring, tidal energy, Marine mammalScottish Government, NERC
2016 (3)
Biological Conservation
vol.195 pp.136-145
(Article)
Searching for trends in river dolphin abundance
Jeffrey E. Moore, Catalina Gomez-Salazar, Fernando Trujillo, M Louise Burt 
Keywords: Abundance, Cryptic, Habitat loss, River dolphin, Inia, Sotalia, Amazon, Bayesian methods, Monitoring
2016 (6)
Journal of Archaeological Science
vol.7 pp.394-407
(Article)
2015 (12)
Revista de Biologia Marina y Oceanografia
vol.50 pp.411-426
(Review article)
Efectos del piojo del salmon Lepeophtheirus salmonis (Copepoda: Caligidae) en las poblaciones de truchas (Salmo trutta) de la costa NE Atlantic
Pablo Arechavala-Lopez, Eva Thorstad, Christopher David Todd, Ingebrigt Uglem, Paal Bjorn, Patrick Gargan, Knut Vollset, Elina Halttunen, Steinar Kalas, Marius Berg, Bengt Finstad 
Keywords: Parasites, Aquaculture, Impact, Salmonids, Management
2015 (20/8)
Aquaculture Environment Interactions
vol.7 pp.91-113
(Review article)
Effects of salmon lice Lepeophtheirus salmonis on wild sea trout Salmo trutta – a literature review
Eva Thorstad, Christopher David Todd, Ingebrigt Uglem, Paal Arne Bjorn, Patrick Gargan, Knut Vollset, Elina Halttunen, Steinar Kalas, Marius Berg, Bengt Finstad 
Keywords: Salmon lice, Lepeophtheirus salmonis, Sea trout, Salmo trutta, Parasite, Aquaculture, Salmon farming
2015 (12)
Ecology and Evolution
vol.5 pp.5561-5572
(Article)
From species to communities
Amy Elizabeth Deacon, Hideyasu Shimadzu, Maria Dornelas, Indar W. Ramnarine, Anne Magurran 
Keywords: Allocation rules, Anthropogenic disturbance, Biodiversity, Community capacity, Diversity indices, Ecosystem services, Freshwater ecology, Poecilia reticulata
2014
Canadian Journal of Fisheries and Aquatic Sciences
vol.71 pp.645-655
(Article)
A simple method of dating marine growth circuli on scales of wild one sea-winter and two sea-winter Atlantic salmon (Salmo salar)
Christopher David Todd, Bryce Whyte, Julian MacLean, Crawford Revie, Mike Lonergan, Nora Nell Hanson 
Keywords: Atlantic salmon, Scale circulus, Growth, Date, Tag
2014 (5)
Journal of Marine Systems
vol.133 pp.77-87
(Article)
2014 (19/11)
Royal Society Open Science
vol.1 
(Article)
2014 (16/7)
PLoS One
vol.9 
(Article)
2014 (10)
Ecology of Freshwater Fish
vol.23 pp.483-484
(Book/Film/Article review)

Contact

The Secretary
Scottish Oceans Institute
Institiud Chuantan na h-Alba
Gatty Marine Laboratory
East Sands St Andrews
KY16 8LB
Scotland
UK

tel: +44 (0) 1334 463472
fax: +44 (0) 1334 463443
email: soi@st-andrews.ac.uk

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