Publications

Recent publications


8  (of 8 published available) for Scottish Oceans Institute with keyword SNP clear keyword filter. (source: University of St Andrews PURE)
Please click title of any item for full details.

2018 (18/7)
Frontiers in Genetics
vol.9 
(Review article)
Genomic tools and selective breeding in molluscs
Christopher Michael Hollenbeck, Ian Alistair Johnston 
Keywords: Aquaculture, Genomics, SNP genotyping, Heritability, Marker assisted selection, Genomic selection, Molluscs, Selective breeding
2017 (1/7)
Aquaculture
vol.476 pp.59-64
(Article)
A workflow used to design low density SNP panels for parentage assignment and traceability in aquaculture species and its validation in Atlantic salmon
Daniel Garcia de la Serrana Castillo, Aubrie Onoufriou, Borghild Hillestad, Ian Alistair Johnston 
Keywords: SNP, Parentage assignment, Atlantic salmon, Traceability, Pedigree, Workflow
2016 (21/7)
BMC Genomics
vol.17 
(Article)
Changes in selective pressures associated with human population expansion may explain metabolic and immune related pathways enriched for signatures of positive selection
Alexandra Vatsiou, Eric Bazin, Oscar Eduardo Gaggiotti 
Keywords: Diabetes, Obesity, Human migration, Population expansion, Polygenic selection, Genome scans, Gene set enrichment analysisEpidemiology, Genetics, Ecology, Evolution, Behavior and Systematics
2016 (1)
Molecular Ecology
vol.25 pp.89-103
(Article)
Detection of selective sweeps in structured populations
Alexandra Vatsiou, Eric Bazin, Oscar Eduardo Gaggiotti 
Keywords: Positive selection, Haplotype structure, Genome scanEcology, Evolution, Behavior and Systematics, Genetics
2014 (2/10)
American Journal of Human Genetics
vol.95 pp.394-407
(Article)
Widespread signals of convergent adaptation to high altitude in Asia and America
Matthieu Foll, Oscar Eduardo Gaggiotti, Josephine T Daub, Alexandra Vatsiou, Laurent Excoffier 
2012 (11/5)
BMC Genomics
vol.13 
(Article)
Fast skeletal muscle transcriptome of the Gilthead sea bream (Sparus aurata) determined by next generation sequencing
Daniel Garcia de la Serrana Castillo, Alicia Estevez, Karl Andree, Ian Alistair Johnston 
Keywords: Teleost, Gene paralogues, Splice variants, Newbler, Roche 454, Myogenesis
2012 (31/5)
PLoS One
vol.7 
(Article)
Reasons for the invasive success of a guppy (Poecilia reticulata) population in Trinidad
Eva-Maria Willing, Margarete Hoffmann, Christine Dreyer, Indar Ramnarine, Anne Magurran 
2010 (19/1)
PLoS One
vol.5 
(Article)
Recombination and its impact on the genome of the haplodiploid parasitoid wasp Nasonia
Oliver Niehuis, Michael S. Rosenberg, Bart A. Pannebakker, Tosca Koevoets, Andrea K. Judson, Christopher A. Desjardins, Kathleen Kennedy, David Duggan, Leo W. Beukeboom, Louis van de Zande, David Michael Shuker, John H. Werren, Juergen Gadau 
Keywords: Single nucleotide polymorphism, Maximum likelihood models, X-chromosome centromere, Biased gene conversion, Natural selection, Saccharomyces-cerevisiae, Drosophilia melanogaster, Meiotic recombination

Contact

The Secretary
Scottish Oceans Institute
Institiud Chuantan na h-Alba
Gatty Marine Laboratory
East Sands St Andrews
KY16 8LB
Scotland
UK

tel: +44 (0) 1334 463472
fax: +44 (0) 1334 463443
email: soi@st-andrews.ac.uk

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