Publications

Recent publications


50  (of 181 published available) for Scottish Oceans Institute with keyword Tag clear keyword filter. (source: University of St Andrews PURE)
Please click title of any item for full details.

2019 (1)

(Article)
A 2.6-gram sound and movement tag for studying the acoustic scene and kinematics of echolocating bats
Laura Stidsholt, Mark Johnson, Kristian Beedholm, Lasse Jakobsen, Kathrin Kugler, Signe Brinkløv, Angeles Salles, Cynthia F. Moss, Peter Teglberg Madsen 
Keywords: Archival tag, Auditory scene, Bat echolocation, Biologging, Echogram, Echoic scene, Flight kinematics, Inertial sensors
2019 (3)

(Review article)
A review of unmanned vehicles for the detection and monitoring of marine fauna
Ursula K. Verfuss, Ana Sofia Aniceto, Danielle Harris, Douglas Michael Gillespie, Sophie Fielding, Guillermo Jiménez, Phil Johnston, Rachael R. Sinclair, Agnar Sivertsen, Stian A. Solbø, Rune Storvold, Martin Biuw, Roy Wyatt 
Keywords: Unmanned vehicles, Marine animal monitoring, Underwater sound, Environmental impact assessment, Offshore industry
2019 (30/1)

(Review article)
Advances in research on the impacts of anti-submarine sonar on beaked whales
Y. Bernaldo De Quirós, A. Fernandez, R. W. Baird, R. L. Brownell, Natacha Aguilar de Soto, D. Allen, M. Arbelo, M. Arregui, A. Costidis, A. Fahlman, A. Frantzis, F. Gulland, M. Iñíguez, Mark Johnson, A. Komnenou, H. Koopman, D. A. Pabst, W. D. Roe, E. Sierra, M. Tejedor, G. Schorr 
Keywords: Beaked whales, Decompression sickness, Naval exercises, Sonar, StrandingBiochemistry, Genetics and Molecular Biology(all), Immunology and Microbiology(all), Environmental Science(all), Agricultural and Biological Sciences(all)
2019 (4/4)

(Article)
Automated peak detection method for behavioral event identification
David A. Sweeney, Stacy L. DeRuiter, Ye Joo McNamara-Oh, Tiago A. Marques, Patricia Arranz Alonso, John Calambokidis 
Keywords: Blue whale, Detection, Lunge, Norm-jerk, Prey capture, Risso's dolphin
2019 (3)

(Article)
Behavioral responses of individual blue whales (Balaenoptera musculus) to mid-frequency military sonar
Brandon Southall, Stacy DeRuiter, Ari Friedlaender, Alison Stimpert, Jeremy Goldbogen, Elliot Hazen, Caroline Casey, Selene Fregosi, Dave Cade, Ann Allen, Catriona M Harris, Greg Schorr, Dave Moretti, Shane Guan, John Calambokidis 
Keywords: Sonar, Marine Mammal, Blue whale, Behavioral response, Endangered, Context
2019 (12/3)

(Article)
Diving behavior and fine-scale kinematics of free-ranging Risso’s dolphins foraging in shallow and deep-water habitats
Patricia Arranz Alonso, Kelly Benoit-Bird, Ari S. Friedlaender, Elliot L. Hazen, Jeremy A. Goldbogen, Alison K. Stimpert, Stacy Lynn De Ruiter, John Calambokidis, Brandon Southall, Andreas Fahlman, Peter Lloyd Tyack 
Keywords: Deep diving odontocete, Foraging energetics, Marine mammal, Grampus griseus, Activity level, Prey value, Central place foraging theory
2019 (25/1)

(Article)
Future directions in research on beaked whales
Sascha Kate Hooker, Natacha Aguilar de Soto, Robin W. Baird, Emma Louise Carroll, Laura Feyrer, Patrick Miller, Aubrie Onoufriou, Greg Schorr, Hal Whitehead 
Keywords: Beaked whale, Hyperoodon, Mesoplodon, Ziphius, Berardius


(Article)
Long-term sound and movement recording tags to study natural behavior and reaction to ship noise of seals
Lonnie Mikkelsen, Mark Johnson, Danuta Maria Wisniewska, Abbo van Neer, Ursula Siebert, Peter Teglberg Madsen, Jonas Teilmann 
Keywords: Anthropogenic noise, Behavioral response, Biologging, DTAG, Exposure rates, Gray seal, Harbor seal, Long-duration acoustic dataloggers
2019 (20/3)

(Article)
Northern bottlenose whales in a pristine environment respond strongly to close and distant navy sonar signals
Paul Wensveen, Saana Isojunno, Rune R. Hansen, Alexander M. Von Benda-beckmann, Lars Kleivane, Sander Van Ijsselmuide, Frans-peter A. Lam, Petter H. Kvadsheim, Stacy L. Deruiter, Charlotte Curé, Tomoko Narazaki, Peter Lloyd Tyack, Patrick Miller 
Keywords: Hyperoodon ampullatus, Military sonar, Cetacean, Marine mammal, Disturbance
2019 (20/3)

(Article)
Predicting acoustic dose associated with marine mammal behavioural responses to sound as detected with fixed acoustic recorders and satellite tags
A.M. von Benda-Beckmann, Paul Wensveen, M. Prior, M.A. Ainslie, R. R. Hansen, Saana Isojunno, F.P.A. Lam, P.H. Kvadsheim, Patrick Miller 
Keywords: Behavioral response, Hyperoodon ampullatus


(Article)
Three-dimensional movements of harbour seals in a tidally energetic channel
Gordon Drummond Hastie, Matthew Bivins, Alexander James Coram, Jonathan Charles David Gordon, Pauline Jepp, Jamie Donald John MacAulay, Carol Elizabeth Sparling, Douglas Michael Gillespie 
Keywords: Behaviour, Environmental impact assessment, Mammals, New techniques, Renewable energyNERC
2018

(Article)
Abundance estimates for sperm whales in the Mediterranean Sea from acoustic line-transect survey
Tim Lewis, Oliver Boisseau, Magnus Danbolt, Douglas Michael Gillespie, Claire Lacey, Russell Leaper, Justin Matthews, Richard McLanaghan, Anna Moscrop 
Keywords: Sperm whale, Mediterranean sea, Abundance estimate, Distribution, Acoustics, Vocalisation, Conservation, Survey - acoustic, Survey - vessel
2018 (2)

(Article)
Cetacean rapid assessment: an approach to fill knowledge gaps and target conservation across large data deficient areas
Gillian Tracey Braulik, Magreth Kasuga, Anja Wittich, Jeremy J Kiszka, Jamie Donald John MacAulay, Douglas Michael Gillespie, Jonathan Charles David Gordon, Said Shaib Said, Philip Steven Hammond 
Keywords: Cetaceans, Distribution, Environmental impact assessement, Management, Marine spatial planning, Rapid assessment, Tanzania
2018 (1/12)

(Article)
Click communication in wild harbour porpoises (Phocoena phocoena)
P. M. Sørensen, D. M. Wisniewska, F. H. Jensen, Mark Johnson, J. Teilmann, P. T. Madsen 
2018 (1)

(Review article)
Comparing methods suitable for monitoring marine mammals in low visibility conditions during seismic surveys
Ursula K. Verfuss, Douglas Michael Gillespie, Jonathan Charles David Gordon, Tiago A. Marques, Brianne Miller, Rachael Plunkett, James A. Theriault, Dominic John Tollit, Daniel P. Zitterbart, Philippe Hubert, Len Thomas 
Keywords: Marine mammals, Monitoring methods, Underwater noise, Seismic survey, Detection performance, Low visibility
2018 (11)

(Article)
Empirical measures of harbor seal behavior and avoidance of an operational tidal turbine
Ruth Joy, Jason D. Wood, Carol Elizabeth Sparling, Dom J. Tollit, Andrea E. Copping, Bernie J McConnell 
Keywords: SeaGen turbine, Harbor seal, Animal tags, Behavioral avoidance, Strike risk
2018 (2/3)

(Article)
Exploring the ocean through soundscapes
Jen Miksis-Olds, Bruce Martin, Peter Lloyd Tyack 
2018 (3)

(Article)
Harbour seals avoid tidal turbine noise
Gordon Drummond Hastie, Debbie JF Russell, Paul Lepper, Jim Elliott, Ben Wilson, Steven Benjamins, David Thompson 
Keywords: Collision risk, Marine mammals, Avoidance, Renewable energy, Pinnipeds, Marine spatial planning, Underwater noise, Tidal turbines, Behavioural responsesNERC
2018 (6/12)

(Article)
High field metabolic rates of wild harbour porpoises
Laia Rojano-Doñate, Birgitte I. McDonald, Danuta M. Wisniewska, Mark Johnson, Jonas Teilmann, Magnus Wahlberg, Jakob Højer-Kristensen, Peter T. Madsen 
Keywords: Bio-logging, Doubly labelled water, Energetics, Food intake, Phocoena, Respiration
2018 (1)

(Review article)
Marine mammals and sonar
Catriona M Harris, Len Thomas, Erin Falcone, John Hildebrand, Dorian Houser, Petter Kvadsheim, Frans-Peter A. Lam, Patrick Miller, David J. Moretti, Andrew Read, Hans Slabbekoorn, Brandon L. Southall, Peter Lloyd Tyack, Douglas Wartzok, Vincent Janik 
Keywords: Sonar, Cetaceans, Human disturbance, Impact assessment, Anti-predator response, Anthropogenic noise, Behavioural response, Marine mammals, Dose response
2018 (2)

(Article)
Modelling the broadband propagation of marine mammal echolocation clicks for click-based population density estimates
Alexander von Benda-Beckmann, Len Thomas, Peter Lloyd Tyack, Michael Ainslie 
2018 (5)

(Article)
Night-life of Bryde’s whales
Sahar Izadi, Mark Johnson, Natacha Aguilar de Soto, Rochelle Constantine 
Keywords: Rest, Sleep, Whales, Diel behavior, Accelerometry, Biologging


(Article)
Selective reactions to different killer whale call categories in two delphinid species
Matthew T. Bowers, Ari S. Friedlaender, Vincent Janik, Douglas P. Nowacek, Nicola Quick, Brandon L. Southall, Andrew Read 
Keywords: Antipredator behavior, Acoustic discrimination, Non-linear acousitcs, Pilot whales, Risso's dolphins


(Review article)
Understanding the population consequences of disturbance
Enrico Pirotta, Daniel P. Costa, Erica Fleishman, Scott D. Kraus, David Lusseau, David Moretti, Leslie Frances New, Robert Schilling Schick, Lisa K. Schwarz, Samantha E. Simmons, Len Thomas, Peter Lloyd Tyack, Michael J. Weise, Randall S. Wells, John Harwood 
Keywords: Anthropogenic disturbance, Environmental impact assessments, Marine mammals, Nonconsumptive effects, Population consequences, Trait-mediated indirect interactions, Uncertainty
2017 (15/12)

(Article)
Acoustic monitoring to document the spatial distribution and hotspots of blast fishing in Tanzania
Gillian Tracey Braulik, Anja Wittich, Jamie Donald John MacAulay, Magreth Kasuga, Jonathan Charles David Gordon, Tim Davenport, Douglas Michael Gillespie 
Keywords: Explosives, Destructive fishing, Acoustic monitoring, Tanzania, Resource management, Fisheries managementEcology, Evolution, Behavior and Systematics
2017 (15/8)

(Article)
Avoidance responses of minke whales to 1–4 kHz naval sonar
Petter H Kvadsheim, Stacy DeRuiter, Lise D Sivle, Jeremy Goldbogen, Rune Roland-Hansen, Patrick Miller, Frans-Peter A Lam, John Calambokidis, Ari Friedlaender, Fleur Visser, Peter Lloyd Tyack, Lars Kleivane, Brandon Southall 
Keywords: Behavioural response, Naval sonar, Minke whale, Balaenoptera acutorostrata, North Pacific, North Atlantic
2017 (14/9)

(Article)
Fine-scale harbour seal usage for informed marine spatial planning
Esther Lane Jones, Carol Elizabeth Sparling, Bernie J McConnell, Chris Morris, Sophie Caroline Smout 
2017 (14/2)

(Article)
From the track to the ocean
Giovani Fiore, Erik Anderson, C. Spencer Garborg, Mark Murray, Mark Johnson, Michael J Moore, Laurens Howle, K. Alex Shorter 
2017

(Other report)
Harbour Seal Decline – vital rates and drivers.
Monica Arso Civil, Sophie Caroline Smout, David Thompson, Andrew Brownlow, Nicolas Davison, Mariel Doeschate, Callan David Duck, Chris Morris, Caroline Cummings, Bernie J McConnell, Ailsa Jane Hall 
Keywords: Scottish Government
2017 (31/3)

(Article)
Hidden Markov models reveal complexity in the diving behaviour of short-finned pilot whales
Saana Isojunno, Dina Sadykova, Matthew Bowers, Douglas P. Nowacek, Andrew J Read 
Keywords: General
2017 (21/2)

(Paper)
In-situ observations using tagged animals
Fabien Roquet, Lars Boehme, Marthan Bester, Horst Bornemann, Sophie Brasseur, Jean-Benoit Charrassin, Daniel Costa, Mike Fedak, Christophe Guinet, Ailsa Jane Hall, Robert Harcourt, Mark Hindell, Kit M. Kovacs, Mary-Anne Lea, Philip Lovell, Andrew Lowther, Christian Lydersen, Clive McMahon, Baptiste Picard, Gilles Reverdin, Cécile Vincent 
2017 (12)

(Article)
Individual, ecological, and anthropogenic influences on activity budgets of long-finned pilot whales
Saana Isojunno, Dinara Sadykova, Stacy Lynn De Ruiter, Charlotte Curé, Fleur Visser, Len Thomas, Patrick Miller, Catriona M Harris 
Keywords: Anthropogenic noise, Activity synchrony, Benthic habitat, Deep diving mammal, DTAG, Ethogram, Globicephala melas, Hidden Markov model, Naval sonar
2017 (1)

(Article)
Insights into Blainville's beaked whale (Mesoplodon densirostris) echolocation ontogeny from recordings of mother-calf pairs
John Durban, Jessica Shaffer, David Moretti, Peter Lloyd Tyack, Luke Edward Rendell 

Contact

The Secretary
Scottish Oceans Institute
Institiud Chuantan na h-Alba
Gatty Marine Laboratory
East Sands St Andrews
KY16 8LB
Scotland
UK

tel: +44 (0) 1334 463472
fax: +44 (0) 1334 463443
email: soi@st-andrews.ac.uk

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