Publications

Recent publications


50  (of 173 published available) for Scottish Oceans Institute with keyword Tag clear keyword filter. (source: University of St Andrews PURE)
Please click title of any item for full details.

2019 (1)
Methods in Ecology and Evolution
vol.10 pp.48-58
(Article)
A 2.6-gram sound and movement tag for studying the acoustic scene and kinematics of echolocating bats
Laura Stidsholt, Mark Johnson, Kristian Beedholm, Lasse Jakobsen, Kathrin Kugler, Signe Brinkløv, Angeles Salles, Cynthia F. Moss, Peter Teglberg Madsen 
Keywords: Archival tag, Auditory scene, Bat echolocation, Biologging, Echogram, Echoic scene, Flight kinematics, Inertial sensors

Marine Pollution Bulletin
vol.140 pp.17-29
(Review article)
A review of unmanned vehicles for the detection and monitoring of marine fauna
Ursula K. Verfuss, Ana Sofia Aniceto, Danielle Harris, Douglas Michael Gillespie, Sophie Fielding, Guillermo Jiménez, Phil Johnston, Rachael R. Sinclair, Agnar Sivertsen, Stian A. Solbø, Rune Storvold, Martin Biuw, Roy Wyatt 
Keywords: Unmanned vehicles, Marine animal monitoring, Underwater sound, Environmental impact assessment, Offshore industry

Frontiers in Ecology and Evolution

(Article)
Diving behavior and fine-scale kinematics of free-ranging Risso’s dolphins foraging in shallow and deep-water habitats
Patricia Arranz Alonso, Kelly Benoit-Bird, Ari S. Friedlaender, Elliot L. Hazen, Jeremy A. Goldbogen, Alison K. Stimpert, Stacy Lynn De Ruiter, John Calambokidis, Brandon Southall, Andreas Fahlman, Peter Lloyd Tyack 
Keywords: Deep diving odontocete, Foraging energetics, Marine mammal, Grampus griseus, Activity level, Prey value, Central place foraging theory
2019 (25/1)
Frontiers in Marine Science
vol.5 
(Article)
Future directions in research on beaked whales
Sascha Kate Hooker, Natacha Aguilar de Soto, Robin W. Baird, Emma Louise Carroll, Laura Feyrer, Patrick Miller, Aubrie Onoufriou, Greg Schorr, Hal Whitehead 
Keywords: Beaked whale, Hyperoodon, Mesoplodon, Ziphius, Berardius

Ecology and Evolution
vol.Early View 
(Article)
Long-term sound and movement recording tags to study natural behavior and reaction to ship noise of seals
Lonnie Mikkelsen, Mark Johnson, Danuta Maria Wisniewska, Abbo van Neer, Ursula Siebert, Peter Teglberg Madsen, Jonas Teilmann 
Keywords: Anthropogenic noise, Behavioral response, Biologging, DTAG, Exposure rates, Gray seal, Harbor seal, Long-duration acoustic dataloggers
2019 (29/1)
Journal of Fish Biology
vol.94 pp.183-186
(Article)
2018 (2)
Aquatic Conservation: Marine and Freshwater Ecosystems
vol.28 pp.216-230
(Article)
Cetacean rapid assessment: an approach to fill knowledge gaps and target conservation across large data deficient areas
Gillian Tracey Braulik, Magreth Kasuga, Anja Wittich, Jeremy J Kiszka, Jamie Donald John MacAulay, Douglas Michael Gillespie, Jonathan Charles David Gordon, Said Shaib Said, Philip Steven Hammond 
Keywords: Cetaceans, Distribution, Environmental impact assessement, Management, Marine spatial planning, Rapid assessment, Tanzania
2018 (1/12)
Scientific Reports
vol.8 
(Article)
Click communication in wild harbour porpoises (Phocoena phocoena)
P. M. Sørensen, D. M. Wisniewska, F. H. Jensen, Mark Johnson, J. Teilmann, P. T. Madsen 
2018 (1)
Marine Pollution Bulletin
vol.126 pp.1-18
(Review article)
Comparing methods suitable for monitoring marine mammals in low visibility conditions during seismic surveys
Ursula K. Verfuss, Douglas Michael Gillespie, Jonathan Charles David Gordon, Tiago A. Marques, Brianne Miller, Rachael Plunkett, James A. Theriault, Dominic John Tollit, Daniel P. Zitterbart, Philippe Hubert, Len Thomas 
Keywords: Marine mammals, Monitoring methods, Underwater noise, Seismic survey, Detection performance, Low visibility
2018 (9/1)
Journal of Experimental Biology
vol.221 
(Article)
2018 (11)
Marine Pollution Bulletin
vol.136 pp.92-106
(Article)
Empirical measures of harbor seal behavior and avoidance of an operational tidal turbine
Ruth Joy, Jason D. Wood, Carol Elizabeth Sparling, Dom J. Tollit, Andrea E. Copping, Bernie J McConnell 
Keywords: SeaGen turbine, Harbor seal, Animal tags, Behavioral avoidance, Strike risk

Aquatic Conservation: Marine and Freshwater Ecosystems
vol.Early View 
(Article)
2018 (2/3)
Acoustics Today
vol.14 pp.26-34
(Article)
Exploring the ocean through soundscapes
Jen Miksis-Olds, Bruce Martin, Peter Lloyd Tyack 
2018 (10)
Behavioral Ecology and Sociobiology
vol.72 
(Article)
2018 (12/3)
Marine Ecology Progress Series
vol.590 pp.247-266
(Article)
2018 (2)
Aquatic Conservation: Marine and Freshwater Ecosystems
vol.28 pp.194-204
(Article)
2018 (3)
Journal of Applied Ecology
vol.55 pp.684-693
(Article)
Harbour seals avoid tidal turbine noise
Gordon Drummond Hastie, Debbie JF Russell, Paul Lepper, Jim Elliott, Ben Wilson, Steven Benjamins, David Thompson 
Keywords: Collision risk, Marine mammals, Avoidance, Renewable energy, Pinnipeds, Marine spatial planning, Underwater noise, Tidal turbines, Behavioural responsesNERC
2018 (6/12)
Journal of Experimental Biology
vol.221 
(Article)
High field metabolic rates of wild harbour porpoises
Laia Rojano-Doñate, Birgitte I. McDonald, Danuta M. Wisniewska, Mark Johnson, Jonas Teilmann, Magnus Wahlberg, Jakob Højer-Kristensen, Peter T. Madsen 
Keywords: Bio-logging, Doubly labelled water, Energetics, Food intake, Phocoena, Respiration
2018 (14/2)
Proceedings of the Royal Society B: Biological Sciences
vol.285 
(Article)
2018 (13/12)
Endangered Species Research
vol.37 pp.269-287
(Article)
2018 (1)
Journal of Applied Ecology
vol.55 pp.396-404
(Review article)
Marine mammals and sonar
Catriona M Harris, Len Thomas, Erin Falcone, John Hildebrand, Dorian Houser, Petter Kvadsheim, Frans-Peter A. Lam, Patrick Miller, David J. Moretti, Andrew Read, Hans Slabbekoorn, Brandon L. Southall, Peter Lloyd Tyack, Douglas Wartzok, Vincent Janik 
Keywords: Sonar, Cetaceans, Human disturbance, Impact assessment, Anti-predator response, Anthropogenic noise, Behavioural response, Marine mammals, Dose response
2018 (2)
Journal of the Acoustical Society of America
vol.143 pp.954-967
(Article)
Modelling the broadband propagation of marine mammal echolocation clicks for click-based population density estimates
Alexander von Benda-Beckmann, Len Thomas, Peter Lloyd Tyack, Michael Ainslie 
2018 (3/12)
Current Biology
vol.28 pp.3878-3885
(Article)
2018 (5)
Behavioral Ecology and Sociobiology
vol.72 
(Article)
Night-life of Bryde’s whales
Sahar Izadi, Mark Johnson, Natacha Aguilar de Soto, Rochelle Constantine 
Keywords: Rest, Sleep, Whales, Diel behavior, Accelerometry, Biologging
2018 (28/2)
Journal of Experimental Biology
vol.221 
(Article)

Journal of Experimental Biology
vol.221 
(Article)
Selective reactions to different killer whale call categories in two delphinid species
Matthew T. Bowers, Ari S. Friedlaender, Vincent Janik, Douglas P. Nowacek, Nicola Quick, Brandon L. Southall, Andrew Read 
Keywords: Antipredator behavior, Acoustic discrimination, Non-linear acousitcs, Pilot whales, Risso's dolphins

Ecology and Evolution
vol.Early View 
(Review article)
Understanding the population consequences of disturbance
Enrico Pirotta, Daniel P. Costa, Erica Fleishman, Scott D. Kraus, David Lusseau, David Moretti, Leslie Frances New, Robert Schilling Schick, Lisa K. Schwarz, Samantha E. Simmons, Len Thomas, Peter Lloyd Tyack, Michael J. Weise, Randall S. Wells, John Harwood 
Keywords: Anthropogenic disturbance, Environmental impact assessments, Marine mammals, Nonconsumptive effects, Population consequences, Trait-mediated indirect interactions, Uncertainty

Geophysical Research Letters
vol.Early View 
(Article)
2017 (15/12)
Marine Pollution Bulletin
vol.125 pp.360-366
(Article)
Acoustic monitoring to document the spatial distribution and hotspots of blast fishing in Tanzania
Gillian Tracey Braulik, Anja Wittich, Jamie Donald John MacAulay, Magreth Kasuga, Jonathan Charles David Gordon, Tim Davenport, Douglas Michael Gillespie 
Keywords: Explosives, Destructive fishing, Acoustic monitoring, Tanzania, Resource management, Fisheries managementEcology, Evolution, Behavior and Systematics
2017 (15/8)
Marine Pollution Bulletin
vol.121 pp.60-68
(Article)
Avoidance responses of minke whales to 1–4 kHz naval sonar
Petter H Kvadsheim, Stacy DeRuiter, Lise D Sivle, Jeremy Goldbogen, Rune Roland-Hansen, Patrick Miller, Frans-Peter A Lam, John Calambokidis, Ari Friedlaender, Fleur Visser, Peter Lloyd Tyack, Lars Kleivane, Brandon Southall 
Keywords: Behavioural response, Naval sonar, Minke whale, Balaenoptera acutorostrata, North Pacific, North Atlantic
2017 (4)
Journal of Avian Biology
vol.48 pp.529-535
(Article)
2017 (14/9)
Scientific Reports
vol.7 
(Article)
Fine-scale harbour seal usage for informed marine spatial planning
Esther Lane Jones, Carol Elizabeth Sparling, Bernie J McConnell, Chris Morris, Sophie Caroline Smout 
2017 (14/2)
PLoS One
vol.12 
(Article)
From the track to the ocean
Giovani Fiore, Erik Anderson, C. Spencer Garborg, Mark Murray, Mark Johnson, Michael J Moore, Laurens Howle, K. Alex Shorter 
2017

(Other report)
Harbour Seal Decline – vital rates and drivers.
Monica Arso Civil, Sophie Caroline Smout, David Thompson, Andrew Brownlow, Nicolas Davison, Mariel Doeschate, Callan David Duck, Chris Morris, Caroline Cummings, Bernie J McConnell, Ailsa Jane Hall 
Keywords: Scottish Government
2017 (31/3)
Scientific Reports
vol.7 
(Article)
Hidden Markov models reveal complexity in the diving behaviour of short-finned pilot whales
Saana Isojunno, Dina Sadykova, Matthew Bowers, Douglas P. Nowacek, Andrew J Read 
Keywords: General
2017 (18/10)
Journal of Experimental Biology
vol.220 pp.3802-3811
(Article)
2017 (8)
Functional Ecology
vol.31 pp.1561-1573
(Article)
2017 (21/2)

(Paper)
In-situ observations using tagged animals
Fabien Roquet, Lars Boehme, Marthan Bester, Horst Bornemann, Sophie Brasseur, Jean-Benoit Charrassin, Daniel Costa, Mike Fedak, Christophe Guinet, Ailsa Jane Hall, Robert Harcourt, Mark Hindell, Kit M. Kovacs, Mary-Anne Lea, Philip Lovell, Andrew Lowther, Christian Lydersen, Clive McMahon, Baptiste Picard, Gilles Reverdin, Cécile Vincent 
2017 (12)
Ecosphere
vol.8 
(Article)
Individual, ecological, and anthropogenic influences on activity budgets of long-finned pilot whales
Saana Isojunno, Dinara Sadykova, Stacy Lynn De Ruiter, Charlotte Curé, Fleur Visser, Len Thomas, Patrick Miller, Catriona M Harris 
Keywords: Anthropogenic noise, Activity synchrony, Benthic habitat, Deep diving mammal, DTAG, Ethogram, Globicephala melas, Hidden Markov model, Naval sonar
2017 (1)
Marine Mammal Science
vol.33 pp.356-364
(Article)
Insights into Blainville's beaked whale (Mesoplodon densirostris) echolocation ontogeny from recordings of mother-calf pairs
John Durban, Jessica Shaffer, David Moretti, Peter Lloyd Tyack, Luke Edward Rendell 

Scientific Reports
vol.7 
(Article)
Intrinsic and extrinsic factors drive ontogeny of early-life at-sea behaviour in a marine top predator
Matthew Ian Daniel Carter, Debbie JF Russell, Clinton John Blight, David Thompson, Philip J. Hosegood,  
Keywords: NERC

Journal of Experimental Biology
vol.220 pp.4150-4161
(Article)
Lack of behavioural responses of humpback whales (Megaptera novaeangliae) indicate limited effectiveness of sonar mitigation
Paul Wensveen, Petter H. Kvadsheim, Frans-Peter A. Lam, Alexander M. von Benda-Beckmann, Lise D. Sivle, Fleur Visser, Charlotte Cure, Peter Lloyd Tyack, Patrick Miller 
Keywords: Behavioural response, Hearing loss, Naval sonar, Baleen whale, Anthropogenic noise, Ramp-up
2017
vol.27 
(Conference contribution)
2017 (10)
Ibis
vol.159 pp.902-918
(Article)
Low and annually variable migratory connectivity in a long distance migrant
Malcolm Burgess, Benedictus Freeman, Alice Risely, Arin Izang, Sam Ivande, Chris Hewson, Will Cresswell 
Keywords: Climate change, Long-distance migrant, Migrant declines, Migratory spread, Paleartic , Serial residence hypothesis
2017 (5)
Journal of Animal Ecology
vol.86 pp.662-673
(Article)
2017 (27/10)
Journal of Cetacean Research and Management
vol.16 pp.29-38
(Article)
2017
Oceanography
vol.30 pp.139-139
(Article)
Ocean observations using tagged animals
Fabien Roquet, Lars Boehme, Barbara Block, Jean Benoit Charrasin, Daniel Costa, Christophe Guinet, Robert G. Harcourt, Mark A. Hindell, Luis A. Hückstädt, Clive R. McMahon, Bill Woodward, Mike Fedak 
2017 (2)
Journal of the Acoustical Society of America
vol.141 pp.1120-1132
(Article)
Passive acoustic methods for fine-scale tracking of harbour porpoises in tidal rapids
Jamie Donald John MacAulay, Jonathan Charles David Gordon, Douglas Michael Gillespie, Chloe Elizabeth Malinka, Simon Northridge 

Contact

The Secretary
Scottish Oceans Institute
Institiud Chuantan na h-Alba
Gatty Marine Laboratory
East Sands St Andrews
KY16 8LB
Scotland
UK

tel: +44 (0) 1334 463472
fax: +44 (0) 1334 463443
email: soi@st-andrews.ac.uk

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