Publications

Recent publications


50  (of 150 published available) for Scottish Oceans Institute with keyword Temporal clear keyword filter. (source: University of St Andrews PURE)
Please click title of any item for full details.


Science of the Total Environment

(Article)
Factors effecting the spatial and temporal distribution of E. coli in intertidal estuarine sediments
David Maxwell Paterson, Tania Cecilia Mendo Aguilar, Emma Clare Defew, Marc I. Stutter, Lisa M. Avery 
Keywords: FIO, Estuaries, Pathogens, Bathing water quality, Sediments
2018 (5)
Marine Policy
vol.91 pp.113-121
(Article)
AIS data to inform small scale fisheries management and marine spatial planning
Mark Andrew James, Tania Cecilia Mendo Aguilar, Esther Lane Jones, Kyla Orr, Ali Mcknight, John Benjamin Thompson 
Keywords: Monitoring, Inshore fisheries, Trips, PostgreSQL, Trajectories
2018 (15/8)
Geomorphology
vol.315 pp.17-32
(Article)
Bedform migration in a mixed sand and cohesive clay intertidal environment and implications for bed material transport predictions
Ian D. Lichtman, Jaco H. Baas, Laurent O. Amoudry, Peter D. Thorne, Jonathan Malarkey, Jeffrey Peakall, David Maxwell Paterson, Sarah J. Bass, Richard D. Cooke, Andrew J. Manning, Alan G. Davies, Daniel R. Parsons, Leiping Ye 
Keywords: Bedform migration, Sediment transport, Mixed cohesive clay-sand, Physical and biological cohesion, Current and wave forcing, Tidal flats
2018 (24/7)
Global Ecology and Biogeography
vol.27 pp.760-786
(Article)
BioTIME
Maria Dornelas, Laura H. Antão, Faye Helen Moyes, Amanda E. Bates, Anne Magurran, DuÅ¡an Adam, Asem A. Akhmetzhanova, Ward Appeltans, José Manuel Arcos, Narayanan Ayyappan, Gal Badihi, Andrew H. Baird, Tiago Egydio Barreto, Claus Bässler, Alecia Bellgrove, Jonathan Belmaker, Lisandro Benedetti-cecchi, Brian J. Bett, Anne D. Bjorkman, Magdalena Błażewicz, Shane A. Blowes, Christopher P. Bloch, Timothy C. Bonebrake, Susan Boyd, Matt Bradford, Andrew J. Brooks, James H. Brown, Helge Bruelheide, Phaedra Budy, Fernando Carvalho, Edward Castañeda-moya, Chaolun Allen Chen, John F. Chamblee, Tory J. Chase, Laura Siegwart Collier, Sharon K. Collinge, Richard Condit, Elisabeth J. Cooper, J. Hans C. Cornelissen, Unai Cotano, Shannan Kyle Crow, Gabriella Damasceno, Claire H. Davies, Robert A. Davis, Frank P. Day, Steven Degraer, Tim S. Doherty, Timothy E. Dunn, Giselda Durigan, J. Emmett Duffy, Dor Edelist, Graham J. Edgar, Robin Elahi, Sarah C. Elmendorf, Anders Enemar, S. K. Morgan Ernest, Rubén Escribano, Marc Estiarte, Brian S. Evans, Tung-yung Fan, Fabiano Turini Farah, Luiz Loureiro Fernandes, Fábio Z. Farneda, Alessandra Fidelis, Robert Fitt, Anna Maria Fosaa, Geraldo Antonio Daher Correa Franco, Grace E. Frank, William R. Fraser, Hernando García, Roberto Cazzolla Gatti, Or Givan, Elizabeth Gorgone-barbosa, William A. Gould, Corinna Gries, Gary D. Grossman, Julio R. Gutierréz, Stephen Hale, Mark E. Harmon, John Harte, Gary Haskins, Donald L. Henshaw, Luise Hermanutz, Pamela Hidalgo, Pedro Higuchi, Andrew Hoey, Gert Van Hoey, Annika Hofgaard, Kristen Holeck, Robert D. Hollister, Richard Holmes, Mia Hoogenboom, Chih-hao Hsieh, Stephen P. Hubbell, Falk Huettmann, Christine L. Huffard, Allen H. Hurlbert, Natália Macedo Ivanauskas, David Janík, Ute Jandt, Anna Jażdżewska, Tore Johannessen, Jill Johnstone, Julia Jones, Jungwon Kang, Tasrif Kartawijaya, Erin C. Keeley, Douglas A. Kelt, Rebecca Jane Kinnear, Kari Klanderud, Halvor Knutsen, Christopher C. Koenig, Alessandra R. Kortz, Kamil Král, Linda A. Kuhnz, Chao-yang Kuo, David J. Kushner, Claire Laguionie-marchais, Lesley T. Lancaster, Cheol Min Lee, Jonathan S. Lefcheck, Esther Lévesque, David Lightfoot, Francisco Lloret, John D. Lloyd, Adrià López-baucells, Maite Louzao, Joshua S. Madin, Borgþór Magnússon, Shahar Malamud, Iain McCombe Matthews, Kent P. Mcfarland, Brian Mcgill, Diane Mcknight, William O. Mclarney, Jason Meador, Peter L. Meserve, Daniel J. Metcalfe, Christoph F. J. Meyer, Anders Michelsen, Nataliya Milchakova, Tom Moens, Even Moland, Jon Moore, Carolina Mathias Moreira, Jörg Müller, Grace Murphy, Isla H. Myers-smith, Randall W. Myster, Andrew Naumov, Francis Neat, James A. Nelson, Michael Paul Nelson, Stephen F. Newton, Natalia Norden, Jeffrey C. Oliver, Esben M. Olsen, Vladimir G. Onipchenko, Krzysztof Pabis, Robert J. Pabst, Alain Paquette, Sinta Pardede, David Maxwell Paterson, Raphaël Pélissier, Josep Peñuelas, Alejandro Pérez-matus, Oscar Pizarro, Francesco Pomati, Eric Post, Herbert H. T. Prins, John C. Priscu, Pieter Provoost, Kathleen L. Prudic, Erkki Pulliainen, B. R. Ramesh, Andrew Rassweiler, Jose Eduardo Rebelo, Daniel C. Reed, Peter B. Reich, Suzanne M. Remillard, Anthony J. Richardson, J. Paul Richardson, Itai Van Rijn, Ricardo Rocha, Victor H. Rivera-monroy, Christian Rixen, Kevin P. Robinson, Ricardo Ribeiro Rodrigues, Denise De Cerqueira Rossa-feres, Lars Rudstam, Henry Ruhl, Catalina S. Ruz, Erica M. Sampaio, Nancy Rybicki, Andrew Rypel, Sofia Sal, Beatriz Salgado, Flavio A. M. Santos, Ana Paula Savassi-coutinho, Sara Scanga, Jochen Schmidt, Robert Schooley, Fakhrizal Setiawan, Kwang-tsao Shao, Gaius R. Shaver, Sally Sherman, Thomas W. Sherry, Jacek Siciński, Ana Carolina Da Silva, Fernando Rodrigues Da Silva, Fabio L. Silveira, Jasper Slingsby, Tracey Smart, Sara J. Snell, Nadejda A. Soudzilovskaia, Gabriel B. G. Souza, Flaviana Maluf Souza, Vinícius Castro Souza, Christopher D. Stallings, Rowan Stanforth, Emily H. Stanley, José Mauro Sterza, Maarten Stevens, Rick Stuart-smith, Yzel Rondon Suarez, Sarah Supp, Jorge Yoshio Tamashiro, Sukmaraharja Tarigan, Gary P. Thiede, Simon Thorn, Anne Tolvanen, Maria Teresa Zugliani Toniato, Ørjan Totland, Robert R. Twilley, Gediminas Vaitkus, Nelson Valdivia, Martha Isabel Vallejo, Thomas J. Valone, Carl Van Colen, Jan Vanaverbeke, Fabio Venturoli, Hans M. Verheye, Marcelo Vianna, Rui P. Vieira, Tomáš VrÅ¡ka, Con Quang Vu, Lien Van Vu, Robert B. Waide, Conor Waldock, Dave Watts, Sara Webb, Tomasz Wesołowski, Ethan P. White, Claire E. Widdicombe, Dustin Wilgers, Richard Williams, Stefan B. Williams, Mark Williamson, Michael R. Willig, Trevor J. Willis, Sonja Wipf, Kerry D. Woods, Eric J. Woehler, Michael L. Zettler 
Keywords: Biodiversity, Global, Spatial, Species richness, Temporal, Turnover
2018 (8)
Dendrochronologia
vol.50 pp.10-22
(Article)
Blue intensity from a tropical conifer’s annual rings for climate reconstruction
Brendan M. Buckley, Kyle G. Hansen, Kevin L. Griffin, Stephanie Schmiege, Rose Oelkers, Rosanne D. D’Arrigo, Daniel K. Stahle, Nicole Davi, Tran Quoc Trung Nguyen, Canh Nam Le, Rob Wilson 
Keywords: Blue intensity, Tropical dendrochronlogia, Fokienia hodginsii, Vietnam, Dendroclimatology, Monsoon climate

Journal of Fish Biology
vol.Early View 
(Article)

Journal of the Marine Biological Association of the United Kingdom
vol.First View 
(Article)
2018 (20/2)
Proceedings of the National Academy of Sciences of the United States of America
vol.115 pp.1843-1847
(Article)
Divergent biodiversity change within ecosystems
Anne Magurran, Amy Elizabeth Deacon, Faye Helen Moyes, Hideyasu Shimadzu, Maria Dornelas, Dawn Phillip, Indar Ramnarine 
Keywords: Biodiversity change, Tropical ecology, Freshwater, Temporal turnover, Community-level regulation
2018 (12/3)
Marine Ecology Progress Series
vol.590 pp.247-266
(Article)
2018 (1/4)
Current Zoology
vol.64 pp.213-221
(Article)
2018 (10/1)
Proceedings of the Royal Society B: Biological Sciences
vol.285 
(Article)
2018 (25/7)
Proceedings of the Royal Society B: Biological Sciences
vol.285 
(Article)
2018 (1)
Oikos
vol.127 pp.134-146
(Article)

Biofouling
vol.Latest Articles 
(Article)
New insights into MagPI: a promising tool to determine the adhesive capacity of biofilm on the mesoscale
Sabine Ulrike Gerbersdorf, Silke Wieprecht, Moritz Thom, David Maxwell Paterson, Marc Scheffler 
Keywords: Biofilm, Adhesion, Stability, MagPI, Electromagnet
2018 (20/11)
Environmental Science and Technology
vol.52 pp.13306-13313
(Article)
Nondestructive 3D imaging and quantification of hydrated biofilm-sediment aggregates using X-ray microcomputed tomography
Naiyu Zhang, Charlotte E.L. Thompson, Ian H. Townend, Kathryn E. Rankin, David Maxwell Paterson, A.J. Manning 
Keywords: Chemistry(all), Environmental Chemistry

Journal of Wildlife Diseases
vol.Online First 
(Article)
Prevalence of urogenital carcinoma in stranded california sea lions (Zalophus californianus) from 2005–2015
Alissa C. Deming, Kathleen M. Colegrove, Padraig J. Duignan, Ailsa Jane Hall, James F. X. Wellehan, Frances M. D. Gulland 
Keywords: California sea lions, Cancer, Stranding, Urogenital carcinoma, Zalophus californianus
2018 (15/5)
Forest Ecology and Management
vol.417 pp.313-322
(Article)
2018 (6)
International Journal of Medical Informatics
vol.114 pp.101-105
(Article)

Aquatic Conservation: Marine and Freshwater Ecosystems
vol.Early View 
(Article)
Spatial versus temporal structure
James A. Thorburn, Rosie Jones, Francis Neat, Cecilia Pinto, Victoria Bendall, Stuart Hetherington, Leslie Noble, Cath Jones 
Keywords: Coastal, Ocean, Distribution, Fish, Fishing, Elasmobranch management, Genetic structure, Relatedness, Social interactions
2018 (7/9)
Scientific Reports
vol.8 
(Article)
Subglacial discharge plume behaviour revealed by CTD-instrumented ringed seals
Alistair Everett, Jack Kohler, Arild Sundfjord, Kit Kovacs, Tomas Torsvik, Ankit Pramanik, Lars Boehme, Christian Lydersen 

Developmental Biology
vol.In press 
(Article)
Transcriptional regulation of the Ciona Gsx gene in the neural plate
Clare Hudson, Rosaria Esposito, Antonio Palladino, Leopoldo Staiano, David Ellard Keith Ferrier, Emmanuel Faure, Patrick Lemaire, Hitoyoshi Yasuo, Antonietta Spagnuolo 
Keywords: Ascidian, Ciona, Gsx, Transcriptional regulation, Promoter, Neural patterning, Para-hox

Geophysical Research Letters
vol.Early View 
(Article)
2017 (4)
Ecosphere
vol.8 
(Article)
2017 (12)
Methods in Ecology and Evolution
vol.8 pp.1690-1702
(Article)

The Journal of Coastal and Island Archaeology
vol.Latest Articles 
(Article)
Chronostratigraphy of an eroding complex Atlantic Round House, Baile Sear, Scotland
Timothy Charles Kinnaird, Tom Dawson, David Sanderson, David Hamilton, Alan Cresswell, Rebecca Rennell 
Keywords: Chronology, Geoarchaeology, Household archaeology
2017 (26/7)
Science Advances
vol.3 
(Article)
Community-level regulation of temporal trends in biodiversity
Nicholas Gotelli, Hideyasu Shimadzu, Maria Dornelas, Brian McGill, Faye Helen Moyes, Anne Magurran 
2017 (6)
Journal of Applied Ecology
vol.54 pp.894-902
(Article)
Counting chirps
G. John Measey, Ben Stevenson, tanya scott, Res Altwegg, David Louis Borchers 
Keywords: Acoustic spatially explicit capture-recapture, Signal strength, Time of arrival, Triangulation, Anurans
2017 (7)
Deep Sea Research Part II: Topical Studies in Oceanography
vol.141 pp.8-19
(Article)
Distribution, abundance and habitat use of deep diving cetaceans in the North-East Atlantic
Emer Rogan, Ana Cañadas, Kelly Macleod, M. Begoña Santos, Bjarni Mikkelsen, Ainhize Uriarte, Olivier Van Canneyt, José Antonio Vázquez, Philip Steven Hammond 
Keywords: Design-based abundance, Model-based abundance, Beaked whales, Sperm whales, Pilot whales, Distribution, Deep divers, Habitat models
2017 (2)
Ecology
vol.98 pp.583-590
(Article)
Estimates of local biodiversity change over time stand up to scrutiny
Mark Vellend, Maria Dornelas, Lander Baeten, Robin Beauséjour, Carissa D. Brown, Pieter De Frenne, Sarah C. Elmendorf, Nicholas J Gotelli, Faye Helen Moyes, Isla H. Myers-Smith, Anne Magurran, Brian J. McGill, Hideyasu Shimadzu,  
Keywords: Biodiversity, Meta-analysis, Species richness, Temporal change
2017 (10)
Advances in Statistical Analysis
vol.101 pp.475-494
(Article)
2017 (6)
Water Resources Research
vol.53 pp.4787-4801
(Article)
Hindered erosion
X. D. Chen, C. K. Zhang, David Maxwell Paterson, C. E. L. Thompson, I. H. Townend, Z. Gong, Z. Zhou, Q. Feng 
Keywords: Biostabilisation, Sediment erosion process, EPS vertical distribution, Bio-sediment system
2017 (12)
Animal Behaviour
vol.134 pp.167-175
(Article)
2017 (1/5)
Quaternary Science Reviews
vol.163 pp.1-22
(Article)
Last millennium Northern Hemisphere summer temperatures from tree rings
Kevin J. Anchukaitis, Rob Wilson, Keith R. Briffa, Ulf Büntgen, Edward R. Cook, Rosanne D'Arrigo, Nicole Davi, Jan Esper, David Frank, Björn E. Gunnarson, Gabi Hegerl, Samuli Helama, Stefan Klesse, Paul J. Krusic, Hans W. Linderholm, Vladimir Myglan, Timothy J. Osborn, Peng Zhang, Lea Schneider, Andrew Schurer, Greg Wiles, Eduardo Zorita 
Keywords: Tree-rings, Northern Hemisphere, Last millennium, Common Era, Summer temperatures, Reconstruction, Spatial
2017
vol.27 
(Conference contribution)
2017 (5)
Journal of Animal Ecology
vol.86 pp.662-673
(Article)
2017 (10)
Advances in Statistical Analysis
vol.101 pp.461-474
(Article)
2017 (16/1)
Agriculture, Ecosystems & Environment
vol.237 pp.280-289
(Article)
2017 (10)
Biological Conservation
vol.214 pp.23-34
(Article)
2017 (12)
Annals of Applied Statistics
vol.11 pp.2270-2297
(Article)
Point process models for spatio-temporal distance sampling data from a large-scale survey of blue whales
Joyce Yuan , F. E. Bachl, F. Lindgren, David Louis Borchers, Janine Baerbel Illian, Stephen Terrence Buckland, H Rue, T. Gerrodette 
2017 (1)
Journal of Geophysical Research: Solid Earth
vol.122 pp.214-223
(Article)
Raising the Gangdese Mountains in southern Tibet
Di-Cheng Zhu, Qing Wang, Peter Anthony Cawood, Zhi-Dan Zhao, Xuan-Xue Mo 
Keywords: Crustal thickness, Gangdese Batholith, Paleoelevation, Driving mechanism of uplift, Southern Tibet
2017 (2/2)
vol.602 
(Commissioned report)
Review of analytical approaches for identifying usage and foraging areas at sea for harbour seals
Esther Lane Jones, Sophie Caroline Smout, Debbie JF Russell, Eunice Pinn, Bernie J McConnell 
Keywords: JNCC
2017 (15/4)
Earth and Planetary Science Letters
vol.464 pp.142-154
(Article)
Short episodes of crust generation during protracted accretionary processes
Gong-Jian Tang, Sun-Lin Chung, Chris Hawkesworth, Peter Anthony Cawood, Qiang Wang, Derek A. Wyman, Yi-Gang Xu, Zhen-Hua Zhao 
Keywords: Accretionary orogen, Crustal generation, Granites, North Xinjiang, Central Asian Orogenic Belt

Scientific Reports
vol.7 
(Article)
Spatial distribution of citizen science casuistic observations for different taxonomic groups
Patrícia Tiago, Ana Ceia-Hasse, Tiago A. Marques, César Capinha, Henrique M. Pereira 
2017 (15/3)
International Journal of Climatology
vol.37 pp.1540-1556
(Article)
Spatial reconstruction of Scottish summer temperatures from tree rings
Björn E. Gunnarson, Neil J. Loader, Edward R. Cook, Daniel L. Druckenbrod, Rob Wilson 
Keywords: Dendroclimatology, Tree ring, Temperature, Spatial reconstruction, Scots pine, Scotland
2017 (3)
Journal of the Acoustical Society of America
vol.141 pp.1962-1974
(Article)
Spatio-temporal variation in click production rates of beaked whales
Victoria E. Warren, Tiago A. Marques, Danielle Harris, Len Thomas, Peter Lloyd Tyack, Natacha Aguilar de Soto, Mark Johnson 
Keywords: Arts and Humanities (miscellaneous), Acoustics and Ultrasonics

Contact

The Secretary
Scottish Oceans Institute
Institiud Chuantan na h-Alba
Gatty Marine Laboratory
East Sands St Andrews
KY16 8LB
Scotland
UK

tel: +44 (0) 1334 463472
fax: +44 (0) 1334 463443
email: soi@st-andrews.ac.uk

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