Publications

Recent publications

Alkaline-silicate REE-HFSE systems
Beard, C. D., Goodenough, K. M., Borst, A. M., Wall, F., Siegfried, P. R., Deady, E. A., Pohl, C., Hutchison, W., Finch, A. A., Walter, B. F., Elliott, H. A. L. & Brauch, K., 1 Feb 2023, In: Economic Geology. 118, 1, p. 177-208 32 p.
Research output: Contribution to journalArticlepeer-review

An expert-based system to predict population survival rate from health data
Schwacke, L. H., Thomas, L., Wells, R. S., Rowles, T. K., Bossart, G., Townsend, F., Mazzoil, M., Allen, J. B., Balmer, B. C., Barleycorn, A. A., Barratclough, A., Burt, M. L., De Guise, S., Fauquier, D., Gomez, F. M., Kellar, N. M., Schwacke, J. H., Speakman, T. R., Stolen, E., Quigley, B. M., Zolman, E. S. & Smith, C. R., 25 Jan 2023, (Accepted/In press) In: Conservation Biology.
Research output: Contribution to journalArticlepeer-review

Carbon accumulation and storage across contrasting saltmarshes of Scotland
Miller, L., Smeaton, C., Yang, H. & Austin, W., 5 Mar 2023, In: Estuarine, Coastal and Shelf Science. 282, 15 p., 108223.
Research output: Contribution to journalArticlepeer-review

Climatic controls on the survival and loss of ancient types of barley on North Atlantic Islands
Martin, P., Brown, T. A., George, T. S., Gunnarson, B., Loader, N. J., Ross, P., Wishart, J. & Wilson, R., 18 Jan 2023, In: Climatic Change. 176, 2, 20 p., 4.
Research output: Contribution to journalArticlepeer-review

Consequences of in vitro benzyl butyl phthalate exposure for blubber gene expression and insulin-induced Akt activation in juvenile grey seals
Tranganida, A., Hall, A. J., Armstrong, H. C., Moss, S. E. W. & Bennett, K. A., 1 Jan 2023, In: Environmental Pollution. 316, 2, 14 p., 120688.
Research output: Contribution to journalArticlepeer-review

Deep learning in population genetics
Korfmann, K., Gaggiotti, O. E. & Fumagalli, M., 2 Feb 2023, (E-pub ahead of print) In: Genome Biology and Evolution. 15, 2, 20 p., evad008.
Research output: Contribution to journalReview articlepeer-review

Directional hydrophone clusters reveal evasive responses of small cetaceans to disturbance during construction at offshore windfarms
Graham, I. M., Gillespie, D., Gkikopoulou, K. C., Hastie, G. D. & Thompson, P. M., 18 Jan 2023, In: Biology Letters. 19, 1, 6 p., 20220101.
Research output: Contribution to journalArticlepeer-review

Estimating energetic intake for marine mammal bioenergetic models
Booth, C. G., McHuron, E., Guilpin, M., Darias-O'Hara, A-K., Ransijn, J., Ryder, M., Nabe-Nielsen, J., Smout, S. C., Pirotta, E., Rosen, D. & Costa, D., 4 Feb 2023, (E-pub ahead of print) In: Conservation Physiology. 11, 1, 22 p., coac083.
Research output: Contribution to journalReview articlepeer-review

Estimating the effects of stressors on the health, survival and reproduction of a critically endangered, long-lived species
Pirotta, E., Schick, R., Hamilton, P., Harris, C. M., Hewitt, J., Knowlton, A. R., Kraus, S., Meyer-Gutbrod, E., Moore, M. J., Pettis, H., Photopoulou, T., Rolland, R., Tyack, P. L. & Thomas, L., 6 Feb 2023, (E-pub ahead of print) In: Oikos. Early View, 15 p., e09801.
Research output: Contribution to journalArticlepeer-review

Evidence for the first multi-species shark nursery area in Atlantic Africa (Boa Vista Island, Cabo Verde)
Rosa, R., Nunes, E., Pissarra, V., Santos, C. P., Varela, J., Baptista, M., Castro, J., Paula, J. R., Repolho, T., Marques, T. A., Freitas, R. & Frazão Santos, C., 1 Feb 2023, In: Frontiers in Marine Science. 10, 8 p., 1077748.
Research output: Contribution to journalArticlepeer-review

Evidence, or not, for late Tonian break-up of Rodinia? The Dalradian Supergroup, Scotland
Prave, T., Fallick, A. E. & Kirsimäe, K., 3 Mar 2023, In: Journal of the Geological Society. 180, 2, 11 p., jgs2022-134.
Research output: Contribution to journalArticlepeer-review

Facilitating biodiversity conservation through partnerships to achieve transformative outcomes
White, R., Schmook, B., Calmé, S., Giordano, A., Hausser, Y., Kimmel, L., Lecuyer, L. M., Lucherini, M., Méndez-Medina, C. & Peña-Mondragón, J. L., 1 Mar 2023, (E-pub ahead of print) In: Conservation Biology. Early View, e14057.
Research output: Contribution to journalArticlepeer-review

Fitness correlates of blubber oxidative stress and cellular defences in grey seals (Halichoerus grypus): support for the life history-oxidative stress theory from an animal model of simultaneous lactation and fasting
Armstrong, H. C., Russell, D. JF., Moss, S., Pomeroy, P. & Bennett, K. A., 18 Mar 2023, (E-pub ahead of print) In: Cell Stress and Chaperones. 16 p.
Research output: Contribution to journalArticlepeer-review

Global drivers of variation in cup nest size in passerine birds
Vanadzina, K., Street, S., Healy, S. D., Laland, K. & Sheard, C., 7 Feb 2023, In: Journal of Animal Ecology. 92, 2, p. 338-351 14 p., 13815.
Research output: Contribution to journalArticlepeer-review

Hydrothermal regeneration of ammonium as a basin-scale driver of primary productivity
Stueeken, E. E., Kirsimäe, K., Lepland, A. & Prave, T., 2023, (E-pub ahead of print) In: Astrobiology. 23, 3
Research output: Contribution to journalArticlepeer-review

Learning stage-wise GANs for whistle extraction in time-frequency spectrograms
Li, P., Roch, M. A., Klinck, H., Fleishman, E., Gillespie, D., Nosal, E-M., Shiu, Y. & Liu, X., 1 Mar 2023, (E-pub ahead of print) In: IEEE Transactions on Multimedia. p. 1-13 13 p.
Research output: Contribution to journalArticlepeer-review

Minimising discards while taking revenue into account: spatio-temporal assessment of catches in an artisanal shrimp trawl fishery in Peru
Mendo, T., Ransijn, J., Gomez, I., Gozzer-Wuest, R., Paradinas, I., James, M. A. & Mendo, J., May 2023, In: Fisheries Research. 261, 7 p., 106623.
Research output: Contribution to journalArticlepeer-review

Peru Case Study: Big Challenges for Small Islands: Management and Governance of “Lobos de Afuera” Islands in the Peruvian Upwelling Ecosystem
Del Solar, A., Alfaro-cordova, E., Mendo, T., Ortega-cisneros, K., Arias Schreiber, M., Grillo-núñez, J. & Alfaro-shigueto, J., 17 Jan 2023, Challenges in Tropical Coastal Zone Management: Experiences and Lessons Learned. Wolff, M., Ferse, S. C. A. & Govan, H. (eds.). Springer International Publishing, p. 303-322 Chapter 17
Research output: Chapter in Book/Report/Conference proceedingChapter

Pooling robustness in distance sampling: avoiding bias when there is unmodelled heterogeneity
Rexstad, E., Buckland, S. T., Marshall, L. H. & Borchers, D., 6 Jan 2023, In: Ecology and Evolution. 13, 1, 11 p., e9684.
Research output: Contribution to journalArticlepeer-review

Population structure and genetic connectivity reveals distinctiveness of Irish harbour seals (Phoca vitulina) and implications for conservation management
Steinmetz, K., Murphy, S., Cadhla, O. Ó., Carroll, E. L., Onoufriou, A. B., Russell, D. J. F., Cronin, M. & Mirimin, L., 1 Feb 2023, In: Aquatic Conservation: Marine and Freshwater Ecosystems. 33, 2, p. 160-178 19 p.
Research output: Contribution to journalArticlepeer-review

Regional occupancy increases for widespread species but decreases for narrowly distributed species in metacommunity time series
Xu, W-B., Blowes, S. A., Brambilla, V., Chow, C. F. Y., Fontrodona-Eslava, A., Martins, I. S., McGlinn, D., Moyes, F., Sagouis, A., Shimadzu, H., van Klink, R., Magurran, A. E., Gotelli, N. J., McGill, B. J., Dornelas, M. & Chase, J. M., 16 Mar 2023, In: Nature Communications. 14, 11 p., 1463.
Research output: Contribution to journalArticlepeer-review

Response of fish stocks in Lake Victoria to enforcement of the ban on illegal fishing: are there lessons for management?
Nyamweya, C. S., Natugonza, V., Kashindye, B. B., Mangeni-Sande, R., Kagoya, E., Mpomwenda, V., Mziri, V., Elison, M., Mlaponi, E., Ongore, C., Makori, A., Shaban, S. S., Aura, C. M., Kayanda, R., Taabu-Munyaho, A., Njiru, J., Ogari, Z., Proud, R. & Brierley, A. S., Apr 2023, In: Journal of Great Lakes Research. 49, 2, p. 531-544 14 p.
Research output: Contribution to journalArticlepeer-review

Sterols, free fatty acids, and total fatty acid content in the massive Porites spp. corals cultured under different pCO2 and temperature treatments
von Xylander, N. S. H., Young, S., Cole, C. S., Smith, T. K. & Allison, N., 6 Mar 2023, (E-pub ahead of print) In: Coral Reefs. First Online
Research output: Contribution to journalArticlepeer-review

Suppressed basal melting in the eastern Thwaites Glacier grounding zone
Davis, P. E. D., Nicholls, K. W., Holland, D. M., Schmidt, B. E., Washam, P., Riverman, K. L., Arthern, R. J., Vankova, I., Eayrs, C., Smith, J. A., Anker, P. G. D., Mullen, A. D., Dichek, D., Lawrence, J. D., Meister, M. M., Clyne, E., Baskinski-Ferris, A., Rignot, E., Queste, B. Y., Boehme, L., Heywood, K. J., Anandakrishnan, S. & Makinson, K., 16 Feb 2023, In: Nature. 614, p. 479-485 21 p.
Research output: Contribution to journalArticlepeer-review

Temporal change in functional rarity in marine fish assemblages
Moyes, F. H., Trindade Santos, I. & Magurran, A., 22 Feb 2023, In: Proceedings of the Royal Society B: Biological Sciences. 290, 1993, 8 p.
Research output: Contribution to journalArticlepeer-review

The conservation of Afro-Palaearctic migrants: what we are learning and what we need to know
Vickery, J., Mallord, J., Adams, W., Beresford, A., Both, C., Cresswell, W., Diop, N., Ewing, S., Gregory, R., Morrison, C., Sanderson, F., Thorup, K., Van Wijk, R. & Hewson, C., 14 Feb 2023, (E-pub ahead of print) In: Ibis. EarlyView, 22 p.
Research output: Contribution to journalReview articlepeer-review

The influence of El Niño Southern Oscillation on the population dynamics of oceanic manta rays in the Mexican Pacific
Cabral, M. M. P., Stewart, J. D., Marques, T. A., Ketchum, J. T., Ayala-Bocos, A., Hoyos-Padilla, E. M. & Reyes-Bonilla, H., 1 Jan 2023, In: Hydrobiologia. 850, 2, p. 257-267 11 p.
Research output: Contribution to journalArticlepeer-review

The role of multidimensional poverty in antibiotic misuse: a mixed-methods study of self-medication and non-adherence in Kenya, Tanzania, and Uganda
Green, D. L., Keenan, K., Fredricks, K. J., Huque, S. I., Mushi, M. F., Kansiime, C., Asiimwe, B., Kiiru, J., Mshana, S. E., Neema, S., Mwanga, J. R., Kesby, M., Lynch, A. G., Worthington, H., Olamijuwon, E., Abed Al Ahad, M., Aduda, A., Njeru, J. M., Mmbaga, B. T., Bazira, J., Sandeman, A., Stelling, J., Gillespie, S. H., Kibiki, G., Sabiiti, W., Sloan, D. J., Holden, M. T. G., Smith, V. A., Decano, A. G., Maldonado-Barragán, A., Aanensen, D., Ntinginya, N. E., Elliott, A. & Clarkson, M., 1 Jan 2023, In: The Lancet Global Health. 11, 1, p. e59-e68 10 p.
Research output: Contribution to journalArticlepeer-review

The stability of inviscid Beltrami flow between parallel free-slip impermeable boundaries
Dritschel, D. G. & Frey, M., 9 Jan 2023, (E-pub ahead of print) In: Journal of Fluid Mechanics. 954, 34 p., A31.
Research output: Contribution to journalArticlepeer-review

Wildlife population assessment: changing priorities driven by technological advances
Buckland, S. T., Borchers, D. L., Marques, T. A. & Fewster, R. M., Jun 2023, In: Journal of Statistical Theory and Practice. 17, 2, 22 p., 20.
Research output: Contribution to journalArticlepeer-review

Aeromonas spp. prevalence, virulence and antimicrobial resistance in an ex situ program for threatened freshwater fish – a pilot study with protective measures
Grilo, M. L., Amaro, G., Chambel, L., Marques, C. S., Marques, T. A., Gil, F., Sousa-Santos, C., Robalo, J. I. & Oliveira, M., 11 Feb 2022, In: Animals. 12, 4, 436.
Research output: Contribution to journalArticlepeer-review

Silbido profundo: an open source package for the use of deep learning to detect odontocete whistles
Conant, P. C., Li, P., Liu, X., Klinck, H., Fleishman, E., Gillespie, D., Nosal, E-M. & Roch, M. A., 27 Dec 2022, (E-pub ahead of print) In: Journal of the Acoustical Society of America. 152, 6, p. 3800-3808 9 p.
Research output: Contribution to journalArticlepeer-review

A Bayesian network structure learning approach to identify genes associated with stress in spleens of chickens
Videla Rodriguez, E. A., Mitchell, J. B. O. & Smith, V. A., 6 May 2022, In: Scientific Reports. 12, 8 p., 7482.
Research output: Contribution to journalArticlepeer-review

A bathymetric and sub-bottom investigation of the Tammisheh Wall's northremost section submerged in the Caspian Sea
Bates, C. R., Rekavandi, H. & Tofighain, H., 25 Jun 2022, Ancient Arms Race: Antiquity's Largest Fortresses and Sasanian Military Networks of Northern Iran:. Oxbow, p. 415-425 10 p.
Research output: Chapter in Book/Report/Conference proceedingChapter

A collection of best practices for the collection and analysis of bioacoustic data
Oswald, J. N., Van Cise, A. M., Dassow, A., Elliott, T., Johnson, M. T., Ravignani, A. & Podos, J., 25 Nov 2022, In: Applied Sciences. 12, 23, 22 p., 12046.
Research output: Contribution to journalReview articlepeer-review

 

 

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Scottish Oceans Institute
Institiud Chuantan na h-Alba
University of St Andrews
Gatty Marine Laboratory
East Sands St Andrews
KY16 8LB
Scotland
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